Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31754 | 95485;95486;95487 | chr2:178545976;178545975;178545974 | chr2:179410703;179410702;179410701 |
N2AB | 30113 | 90562;90563;90564 | chr2:178545976;178545975;178545974 | chr2:179410703;179410702;179410701 |
N2A | 29186 | 87781;87782;87783 | chr2:178545976;178545975;178545974 | chr2:179410703;179410702;179410701 |
N2B | 22689 | 68290;68291;68292 | chr2:178545976;178545975;178545974 | chr2:179410703;179410702;179410701 |
Novex-1 | 22814 | 68665;68666;68667 | chr2:178545976;178545975;178545974 | chr2:179410703;179410702;179410701 |
Novex-2 | 22881 | 68866;68867;68868 | chr2:178545976;178545975;178545974 | chr2:179410703;179410702;179410701 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | None | None | 0.904 | N | 0.435 | 0.409 | 0.243972157842 | gnomAD-4.0.0 | 1.59121E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85814E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3184 | likely_benign | 0.3297 | benign | -0.228 | Destabilizing | 0.86 | D | 0.464 | neutral | None | None | None | None | I |
N/C | 0.3107 | likely_benign | 0.3602 | ambiguous | 0.144 | Stabilizing | 0.998 | D | 0.676 | prob.neutral | None | None | None | None | I |
N/D | 0.4707 | ambiguous | 0.4968 | ambiguous | 0.259 | Stabilizing | 0.822 | D | 0.485 | neutral | N | 0.449176219 | None | None | I |
N/E | 0.756 | likely_pathogenic | 0.7827 | pathogenic | 0.243 | Stabilizing | 0.86 | D | 0.454 | neutral | None | None | None | None | I |
N/F | 0.6559 | likely_pathogenic | 0.6871 | pathogenic | -0.641 | Destabilizing | 0.956 | D | 0.635 | neutral | None | None | None | None | I |
N/G | 0.404 | ambiguous | 0.4017 | ambiguous | -0.388 | Destabilizing | 0.86 | D | 0.475 | neutral | None | None | None | None | I |
N/H | 0.0964 | likely_benign | 0.1477 | benign | -0.313 | Destabilizing | 0.014 | N | 0.327 | neutral | N | 0.463743027 | None | None | I |
N/I | 0.3558 | ambiguous | 0.3784 | ambiguous | 0.105 | Stabilizing | 0.971 | D | 0.649 | neutral | N | 0.46732205 | None | None | I |
N/K | 0.6973 | likely_pathogenic | 0.7491 | pathogenic | 0.06 | Stabilizing | 0.822 | D | 0.426 | neutral | N | 0.454179394 | None | None | I |
N/L | 0.2626 | likely_benign | 0.298 | benign | 0.105 | Stabilizing | 0.956 | D | 0.643 | neutral | None | None | None | None | I |
N/M | 0.4607 | ambiguous | 0.4609 | ambiguous | 0.026 | Stabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | I |
N/P | 0.7128 | likely_pathogenic | 0.7494 | pathogenic | 0.02 | Stabilizing | 0.993 | D | 0.561 | neutral | None | None | None | None | I |
N/Q | 0.4855 | ambiguous | 0.53 | ambiguous | -0.215 | Destabilizing | 0.956 | D | 0.467 | neutral | None | None | None | None | I |
N/R | 0.6603 | likely_pathogenic | 0.7189 | pathogenic | 0.107 | Stabilizing | 0.956 | D | 0.466 | neutral | None | None | None | None | I |
N/S | 0.1059 | likely_benign | 0.1068 | benign | -0.116 | Destabilizing | 0.822 | D | 0.473 | neutral | N | 0.392898862 | None | None | I |
N/T | 0.1965 | likely_benign | 0.1985 | benign | 0.002 | Stabilizing | 0.904 | D | 0.435 | neutral | N | 0.396960674 | None | None | I |
N/V | 0.3437 | ambiguous | 0.3494 | ambiguous | 0.02 | Stabilizing | 0.978 | D | 0.647 | neutral | None | None | None | None | I |
N/W | 0.8426 | likely_pathogenic | 0.8699 | pathogenic | -0.717 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | I |
N/Y | 0.252 | likely_benign | 0.2929 | benign | -0.414 | Destabilizing | 0.89 | D | 0.583 | neutral | N | 0.507629877 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.