Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3176 | 9751;9752;9753 | chr2:178766558;178766557;178766556 | chr2:179631285;179631284;179631283 |
N2AB | 3176 | 9751;9752;9753 | chr2:178766558;178766557;178766556 | chr2:179631285;179631284;179631283 |
N2A | 3176 | 9751;9752;9753 | chr2:178766558;178766557;178766556 | chr2:179631285;179631284;179631283 |
N2B | 3130 | 9613;9614;9615 | chr2:178766558;178766557;178766556 | chr2:179631285;179631284;179631283 |
Novex-1 | 3130 | 9613;9614;9615 | chr2:178766558;178766557;178766556 | chr2:179631285;179631284;179631283 |
Novex-2 | 3130 | 9613;9614;9615 | chr2:178766558;178766557;178766556 | chr2:179631285;179631284;179631283 |
Novex-3 | 3176 | 9751;9752;9753 | chr2:178766558;178766557;178766556 | chr2:179631285;179631284;179631283 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 0.997 | N | 0.743 | 0.642 | 0.73228921728 | gnomAD-4.0.0 | 1.59065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88232E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3716 | ambiguous | 0.4066 | ambiguous | -0.02 | Destabilizing | 0.939 | D | 0.601 | neutral | N | 0.496480625 | None | None | N |
D/C | 0.9319 | likely_pathogenic | 0.941 | pathogenic | -0.068 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | N |
D/E | 0.2712 | likely_benign | 0.2926 | benign | -0.064 | Destabilizing | 0.02 | N | 0.23 | neutral | N | 0.408944719 | None | None | N |
D/F | 0.8495 | likely_pathogenic | 0.8742 | pathogenic | -0.141 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
D/G | 0.5069 | ambiguous | 0.5659 | pathogenic | -0.145 | Destabilizing | 0.939 | D | 0.619 | neutral | N | 0.511777351 | None | None | N |
D/H | 0.6606 | likely_pathogenic | 0.6924 | pathogenic | 0.345 | Stabilizing | 0.998 | D | 0.706 | prob.neutral | N | 0.511265133 | None | None | N |
D/I | 0.6812 | likely_pathogenic | 0.7205 | pathogenic | 0.244 | Stabilizing | 0.993 | D | 0.754 | deleterious | None | None | None | None | N |
D/K | 0.7495 | likely_pathogenic | 0.7859 | pathogenic | 0.296 | Stabilizing | 0.91 | D | 0.58 | neutral | None | None | None | None | N |
D/L | 0.6593 | likely_pathogenic | 0.6931 | pathogenic | 0.244 | Stabilizing | 0.986 | D | 0.747 | deleterious | None | None | None | None | N |
D/M | 0.865 | likely_pathogenic | 0.8819 | pathogenic | 0.082 | Stabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
D/N | 0.239 | likely_benign | 0.2707 | benign | 0.294 | Stabilizing | 0.939 | D | 0.528 | neutral | N | 0.510546257 | None | None | N |
D/P | 0.8212 | likely_pathogenic | 0.8393 | pathogenic | 0.176 | Stabilizing | 0.993 | D | 0.719 | prob.delet. | None | None | None | None | N |
D/Q | 0.6823 | likely_pathogenic | 0.715 | pathogenic | 0.284 | Stabilizing | 0.973 | D | 0.571 | neutral | None | None | None | None | N |
D/R | 0.7701 | likely_pathogenic | 0.7967 | pathogenic | 0.526 | Stabilizing | 0.986 | D | 0.753 | deleterious | None | None | None | None | N |
D/S | 0.3006 | likely_benign | 0.3346 | benign | 0.108 | Stabilizing | 0.953 | D | 0.471 | neutral | None | None | None | None | N |
D/T | 0.5157 | ambiguous | 0.5474 | ambiguous | 0.199 | Stabilizing | 0.986 | D | 0.653 | neutral | None | None | None | None | N |
D/V | 0.4584 | ambiguous | 0.4937 | ambiguous | 0.176 | Stabilizing | 0.991 | D | 0.735 | prob.delet. | N | 0.510546257 | None | None | N |
D/W | 0.976 | likely_pathogenic | 0.9771 | pathogenic | -0.111 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
D/Y | 0.5556 | ambiguous | 0.5925 | pathogenic | 0.076 | Stabilizing | 0.997 | D | 0.743 | deleterious | N | 0.512309973 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.