Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3177 | 9754;9755;9756 | chr2:178766555;178766554;178766553 | chr2:179631282;179631281;179631280 |
N2AB | 3177 | 9754;9755;9756 | chr2:178766555;178766554;178766553 | chr2:179631282;179631281;179631280 |
N2A | 3177 | 9754;9755;9756 | chr2:178766555;178766554;178766553 | chr2:179631282;179631281;179631280 |
N2B | 3131 | 9616;9617;9618 | chr2:178766555;178766554;178766553 | chr2:179631282;179631281;179631280 |
Novex-1 | 3131 | 9616;9617;9618 | chr2:178766555;178766554;178766553 | chr2:179631282;179631281;179631280 |
Novex-2 | 3131 | 9616;9617;9618 | chr2:178766555;178766554;178766553 | chr2:179631282;179631281;179631280 |
Novex-3 | 3177 | 9754;9755;9756 | chr2:178766555;178766554;178766553 | chr2:179631282;179631281;179631280 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.801 | N | 0.801 | 0.586 | 0.688320708397 | gnomAD-4.0.0 | 1.59067E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85662E-06 | 0 | 0 |
A/T | None | None | 0.022 | N | 0.352 | 0.235 | 0.30212335484 | gnomAD-4.0.0 | 2.40068E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62504E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7017 | likely_pathogenic | 0.7085 | pathogenic | -0.809 | Destabilizing | 0.998 | D | 0.726 | prob.delet. | None | None | None | None | N |
A/D | 0.9581 | likely_pathogenic | 0.9728 | pathogenic | -2.34 | Highly Destabilizing | 0.801 | D | 0.801 | deleterious | N | 0.512923267 | None | None | N |
A/E | 0.9365 | likely_pathogenic | 0.9593 | pathogenic | -2.175 | Highly Destabilizing | 0.842 | D | 0.751 | deleterious | None | None | None | None | N |
A/F | 0.9013 | likely_pathogenic | 0.9267 | pathogenic | -1.031 | Destabilizing | 0.974 | D | 0.823 | deleterious | None | None | None | None | N |
A/G | 0.3379 | likely_benign | 0.3973 | ambiguous | -1.65 | Destabilizing | 0.005 | N | 0.297 | neutral | N | 0.38301733 | None | None | N |
A/H | 0.9608 | likely_pathogenic | 0.9731 | pathogenic | -1.888 | Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
A/I | 0.7366 | likely_pathogenic | 0.7833 | pathogenic | -0.217 | Destabilizing | 0.949 | D | 0.784 | deleterious | None | None | None | None | N |
A/K | 0.975 | likely_pathogenic | 0.9861 | pathogenic | -1.236 | Destabilizing | 0.842 | D | 0.754 | deleterious | None | None | None | None | N |
A/L | 0.731 | likely_pathogenic | 0.7654 | pathogenic | -0.217 | Destabilizing | 0.728 | D | 0.702 | prob.neutral | None | None | None | None | N |
A/M | 0.7514 | likely_pathogenic | 0.8187 | pathogenic | -0.2 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
A/N | 0.8932 | likely_pathogenic | 0.9217 | pathogenic | -1.323 | Destabilizing | 0.949 | D | 0.81 | deleterious | None | None | None | None | N |
A/P | 0.6873 | likely_pathogenic | 0.6494 | pathogenic | -0.528 | Destabilizing | 0.012 | N | 0.51 | neutral | N | 0.486348146 | None | None | N |
A/Q | 0.9254 | likely_pathogenic | 0.9505 | pathogenic | -1.264 | Destabilizing | 0.974 | D | 0.786 | deleterious | None | None | None | None | N |
A/R | 0.9436 | likely_pathogenic | 0.9623 | pathogenic | -1.208 | Destabilizing | 0.949 | D | 0.791 | deleterious | None | None | None | None | N |
A/S | 0.2057 | likely_benign | 0.2439 | benign | -1.661 | Destabilizing | 0.454 | N | 0.634 | neutral | N | 0.506662276 | None | None | N |
A/T | 0.2103 | likely_benign | 0.3016 | benign | -1.391 | Destabilizing | 0.022 | N | 0.352 | neutral | N | 0.511093189 | None | None | N |
A/V | 0.3981 | ambiguous | 0.4479 | ambiguous | -0.528 | Destabilizing | 0.669 | D | 0.671 | neutral | N | 0.428408565 | None | None | N |
A/W | 0.9866 | likely_pathogenic | 0.9912 | pathogenic | -1.641 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
A/Y | 0.9527 | likely_pathogenic | 0.9664 | pathogenic | -1.111 | Destabilizing | 0.991 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.