Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31787 | 95584;95585;95586 | chr2:178545877;178545876;178545875 | chr2:179410604;179410603;179410602 |
N2AB | 30146 | 90661;90662;90663 | chr2:178545877;178545876;178545875 | chr2:179410604;179410603;179410602 |
N2A | 29219 | 87880;87881;87882 | chr2:178545877;178545876;178545875 | chr2:179410604;179410603;179410602 |
N2B | 22722 | 68389;68390;68391 | chr2:178545877;178545876;178545875 | chr2:179410604;179410603;179410602 |
Novex-1 | 22847 | 68764;68765;68766 | chr2:178545877;178545876;178545875 | chr2:179410604;179410603;179410602 |
Novex-2 | 22914 | 68965;68966;68967 | chr2:178545877;178545876;178545875 | chr2:179410604;179410603;179410602 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1225133278 | 0.173 | 1.0 | N | 0.671 | 0.323 | 0.232513804876 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1225133278 | 0.173 | 1.0 | N | 0.671 | 0.323 | 0.232513804876 | gnomAD-4.0.0 | 2.0526E-06 | None | None | None | None | I | None | 0 | 2.23604E-05 | None | 0 | 0 | None | 0 | 0 | 1.79895E-06 | 0 | 0 |
K/T | None | None | 1.0 | N | 0.621 | 0.553 | 0.364926071151 | gnomAD-4.0.0 | 1.3684E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79895E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5612 | ambiguous | 0.5455 | ambiguous | -0.171 | Destabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | I |
K/C | 0.7901 | likely_pathogenic | 0.7368 | pathogenic | -0.307 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/D | 0.8115 | likely_pathogenic | 0.7941 | pathogenic | 0.044 | Stabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
K/E | 0.4314 | ambiguous | 0.4184 | ambiguous | 0.075 | Stabilizing | 0.999 | D | 0.562 | neutral | N | 0.496180732 | None | None | I |
K/F | 0.9245 | likely_pathogenic | 0.9066 | pathogenic | -0.322 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | I |
K/G | 0.7372 | likely_pathogenic | 0.6975 | pathogenic | -0.393 | Destabilizing | 1.0 | D | 0.577 | neutral | None | None | None | None | I |
K/H | 0.4501 | ambiguous | 0.3883 | ambiguous | -0.658 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | I |
K/I | 0.5377 | ambiguous | 0.5173 | ambiguous | 0.344 | Stabilizing | 1.0 | D | 0.637 | neutral | N | 0.474446658 | None | None | I |
K/L | 0.5832 | likely_pathogenic | 0.5622 | ambiguous | 0.344 | Stabilizing | 1.0 | D | 0.577 | neutral | None | None | None | None | I |
K/M | 0.4465 | ambiguous | 0.4321 | ambiguous | 0.067 | Stabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | I |
K/N | 0.7108 | likely_pathogenic | 0.6861 | pathogenic | 0.078 | Stabilizing | 1.0 | D | 0.671 | neutral | N | 0.481559774 | None | None | I |
K/P | 0.7997 | likely_pathogenic | 0.7682 | pathogenic | 0.201 | Stabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | I |
K/Q | 0.2269 | likely_benign | 0.2134 | benign | -0.035 | Destabilizing | 1.0 | D | 0.669 | neutral | N | 0.511611545 | None | None | I |
K/R | 0.0936 | likely_benign | 0.0873 | benign | -0.121 | Destabilizing | 0.999 | D | 0.484 | neutral | N | 0.467494444 | None | None | I |
K/S | 0.6714 | likely_pathogenic | 0.635 | pathogenic | -0.413 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | I |
K/T | 0.3401 | ambiguous | 0.3318 | benign | -0.218 | Destabilizing | 1.0 | D | 0.621 | neutral | N | 0.47898888 | None | None | I |
K/V | 0.5109 | ambiguous | 0.4843 | ambiguous | 0.201 | Stabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | I |
K/W | 0.9002 | likely_pathogenic | 0.8705 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
K/Y | 0.819 | likely_pathogenic | 0.7783 | pathogenic | 0.006 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.