Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31832 | 95719;95720;95721 | chr2:178545616;178545615;178545614 | chr2:179410343;179410342;179410341 |
N2AB | 30191 | 90796;90797;90798 | chr2:178545616;178545615;178545614 | chr2:179410343;179410342;179410341 |
N2A | 29264 | 88015;88016;88017 | chr2:178545616;178545615;178545614 | chr2:179410343;179410342;179410341 |
N2B | 22767 | 68524;68525;68526 | chr2:178545616;178545615;178545614 | chr2:179410343;179410342;179410341 |
Novex-1 | 22892 | 68899;68900;68901 | chr2:178545616;178545615;178545614 | chr2:179410343;179410342;179410341 |
Novex-2 | 22959 | 69100;69101;69102 | chr2:178545616;178545615;178545614 | chr2:179410343;179410342;179410341 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.645 | N | 0.526 | 0.346 | 0.31291088546 | gnomAD-4.0.0 | 1.36847E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79903E-06 | 0 | 0 |
E/K | rs753982218 | 0.764 | 0.645 | N | 0.559 | 0.279 | 0.32082282376 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | I | None | 0 | 5.79E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs753982218 | 0.764 | 0.645 | N | 0.559 | 0.279 | 0.32082282376 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs753982218 | 0.764 | 0.645 | N | 0.559 | 0.279 | 0.32082282376 | gnomAD-4.0.0 | 6.40579E-06 | None | None | None | None | I | None | 0 | 8.47371E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | None | None | 0.928 | N | 0.568 | 0.47 | 0.476908202251 | gnomAD-4.0.0 | 6.84233E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99517E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1083 | likely_benign | 0.0966 | benign | -0.025 | Destabilizing | 0.645 | D | 0.526 | neutral | N | 0.448216214 | None | None | I |
E/C | 0.7277 | likely_pathogenic | 0.6988 | pathogenic | -0.003 | Destabilizing | 0.995 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/D | 0.1025 | likely_benign | 0.1013 | benign | -0.278 | Destabilizing | 0.002 | N | 0.307 | neutral | N | 0.473690662 | None | None | I |
E/F | 0.6213 | likely_pathogenic | 0.5662 | pathogenic | -0.106 | Destabilizing | 0.995 | D | 0.63 | neutral | None | None | None | None | I |
E/G | 0.1513 | likely_benign | 0.1337 | benign | -0.136 | Destabilizing | 0.645 | D | 0.439 | neutral | N | 0.519983099 | None | None | I |
E/H | 0.3695 | ambiguous | 0.3421 | ambiguous | 0.386 | Stabilizing | 0.995 | D | 0.587 | neutral | None | None | None | None | I |
E/I | 0.2109 | likely_benign | 0.1812 | benign | 0.208 | Stabilizing | 0.945 | D | 0.646 | neutral | None | None | None | None | I |
E/K | 0.1235 | likely_benign | 0.1113 | benign | 0.536 | Stabilizing | 0.645 | D | 0.559 | neutral | N | 0.496546092 | None | None | I |
E/L | 0.2449 | likely_benign | 0.2084 | benign | 0.208 | Stabilizing | 0.945 | D | 0.634 | neutral | None | None | None | None | I |
E/M | 0.3402 | ambiguous | 0.3001 | benign | 0.098 | Stabilizing | 0.995 | D | 0.592 | neutral | None | None | None | None | I |
E/N | 0.2076 | likely_benign | 0.1904 | benign | 0.312 | Stabilizing | 0.809 | D | 0.533 | neutral | None | None | None | None | I |
E/P | 0.4072 | ambiguous | 0.3939 | ambiguous | 0.149 | Stabilizing | 0.945 | D | 0.552 | neutral | None | None | None | None | I |
E/Q | 0.1245 | likely_benign | 0.1122 | benign | 0.318 | Stabilizing | 0.864 | D | 0.527 | neutral | N | 0.50868867 | None | None | I |
E/R | 0.2179 | likely_benign | 0.2018 | benign | 0.674 | Stabilizing | 0.945 | D | 0.588 | neutral | None | None | None | None | I |
E/S | 0.1502 | likely_benign | 0.1367 | benign | 0.188 | Stabilizing | 0.547 | D | 0.553 | neutral | None | None | None | None | I |
E/T | 0.1616 | likely_benign | 0.1442 | benign | 0.287 | Stabilizing | 0.894 | D | 0.493 | neutral | None | None | None | None | I |
E/V | 0.1303 | likely_benign | 0.1164 | benign | 0.149 | Stabilizing | 0.928 | D | 0.568 | neutral | N | 0.478867195 | None | None | I |
E/W | 0.8334 | likely_pathogenic | 0.8049 | pathogenic | -0.069 | Destabilizing | 0.995 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/Y | 0.4995 | ambiguous | 0.4621 | ambiguous | 0.118 | Stabilizing | 0.995 | D | 0.577 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.