Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31840 | 95743;95744;95745 | chr2:178545592;178545591;178545590 | chr2:179410319;179410318;179410317 |
N2AB | 30199 | 90820;90821;90822 | chr2:178545592;178545591;178545590 | chr2:179410319;179410318;179410317 |
N2A | 29272 | 88039;88040;88041 | chr2:178545592;178545591;178545590 | chr2:179410319;179410318;179410317 |
N2B | 22775 | 68548;68549;68550 | chr2:178545592;178545591;178545590 | chr2:179410319;179410318;179410317 |
Novex-1 | 22900 | 68923;68924;68925 | chr2:178545592;178545591;178545590 | chr2:179410319;179410318;179410317 |
Novex-2 | 22967 | 69124;69125;69126 | chr2:178545592;178545591;178545590 | chr2:179410319;179410318;179410317 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1696700303 | None | None | N | 0.241 | 0.081 | 0.197625483188 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/N | rs1696700303 | None | None | N | 0.241 | 0.081 | 0.197625483188 | gnomAD-4.0.0 | 6.57194E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46977E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0749 | likely_benign | 0.081 | benign | -0.742 | Destabilizing | 0.035 | N | 0.397 | neutral | None | None | None | None | I |
S/C | 0.0795 | likely_benign | 0.0744 | benign | -0.444 | Destabilizing | 0.915 | D | 0.393 | neutral | N | 0.46869944 | None | None | I |
S/D | 0.3038 | likely_benign | 0.2584 | benign | 0.109 | Stabilizing | 0.081 | N | 0.302 | neutral | None | None | None | None | I |
S/E | 0.3318 | likely_benign | 0.287 | benign | 0.105 | Stabilizing | 0.081 | N | 0.318 | neutral | None | None | None | None | I |
S/F | 0.1798 | likely_benign | 0.1913 | benign | -0.897 | Destabilizing | 0.791 | D | 0.423 | neutral | None | None | None | None | I |
S/G | 0.0934 | likely_benign | 0.0885 | benign | -0.986 | Destabilizing | 0.027 | N | 0.324 | neutral | D | 0.523503406 | None | None | I |
S/H | 0.214 | likely_benign | 0.1758 | benign | -1.368 | Destabilizing | 0.555 | D | 0.374 | neutral | None | None | None | None | I |
S/I | 0.1068 | likely_benign | 0.0992 | benign | -0.199 | Destabilizing | 0.484 | N | 0.453 | neutral | N | 0.428803734 | None | None | I |
S/K | 0.3042 | likely_benign | 0.2566 | benign | -0.598 | Destabilizing | None | N | 0.14 | neutral | None | None | None | None | I |
S/L | 0.0772 | likely_benign | 0.0809 | benign | -0.199 | Destabilizing | 0.149 | N | 0.389 | neutral | None | None | None | None | I |
S/M | 0.1299 | likely_benign | 0.1322 | benign | -0.003 | Destabilizing | 0.935 | D | 0.367 | neutral | None | None | None | None | I |
S/N | 0.0962 | likely_benign | 0.0829 | benign | -0.511 | Destabilizing | None | N | 0.241 | neutral | N | 0.481059351 | None | None | I |
S/P | 0.5035 | ambiguous | 0.6317 | pathogenic | -0.346 | Destabilizing | 0.555 | D | 0.398 | neutral | None | None | None | None | I |
S/Q | 0.2529 | likely_benign | 0.2164 | benign | -0.636 | Destabilizing | 0.235 | N | 0.385 | neutral | None | None | None | None | I |
S/R | 0.2875 | likely_benign | 0.246 | benign | -0.502 | Destabilizing | None | N | 0.241 | neutral | N | 0.493007141 | None | None | I |
S/T | 0.0598 | likely_benign | 0.0608 | benign | -0.581 | Destabilizing | 0.117 | N | 0.353 | neutral | N | 0.388877122 | None | None | I |
S/V | 0.1179 | likely_benign | 0.1181 | benign | -0.346 | Destabilizing | 0.38 | N | 0.419 | neutral | None | None | None | None | I |
S/W | 0.3111 | likely_benign | 0.3092 | benign | -0.855 | Destabilizing | 0.935 | D | 0.631 | neutral | None | None | None | None | I |
S/Y | 0.1591 | likely_benign | 0.1514 | benign | -0.6 | Destabilizing | 0.555 | D | 0.419 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.