Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31867 | 95824;95825;95826 | chr2:178545511;178545510;178545509 | chr2:179410238;179410237;179410236 |
N2AB | 30226 | 90901;90902;90903 | chr2:178545511;178545510;178545509 | chr2:179410238;179410237;179410236 |
N2A | 29299 | 88120;88121;88122 | chr2:178545511;178545510;178545509 | chr2:179410238;179410237;179410236 |
N2B | 22802 | 68629;68630;68631 | chr2:178545511;178545510;178545509 | chr2:179410238;179410237;179410236 |
Novex-1 | 22927 | 69004;69005;69006 | chr2:178545511;178545510;178545509 | chr2:179410238;179410237;179410236 |
Novex-2 | 22994 | 69205;69206;69207 | chr2:178545511;178545510;178545509 | chr2:179410238;179410237;179410236 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs778708400 | None | 1.0 | N | 0.649 | 0.498 | 0.588622743037 | gnomAD-4.0.0 | 3.42136E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49783E-06 | 0 | 0 |
R/S | None | None | 1.0 | N | 0.708 | 0.31 | 0.305086939656 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8348 | likely_pathogenic | 0.8098 | pathogenic | -0.673 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
R/C | 0.3538 | ambiguous | 0.278 | benign | -0.725 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
R/D | 0.9483 | likely_pathogenic | 0.9402 | pathogenic | 0.018 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
R/E | 0.7541 | likely_pathogenic | 0.7309 | pathogenic | 0.174 | Stabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
R/F | 0.8343 | likely_pathogenic | 0.7901 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
R/G | 0.7693 | likely_pathogenic | 0.7333 | pathogenic | -1.006 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.491727992 | None | None | N |
R/H | 0.194 | likely_benign | 0.1533 | benign | -1.247 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
R/I | 0.6323 | likely_pathogenic | 0.5905 | pathogenic | 0.229 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
R/K | 0.2363 | likely_benign | 0.2246 | benign | -0.607 | Destabilizing | 0.997 | D | 0.557 | neutral | N | 0.516076002 | None | None | N |
R/L | 0.5986 | likely_pathogenic | 0.538 | ambiguous | 0.229 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
R/M | 0.644 | likely_pathogenic | 0.6073 | pathogenic | -0.314 | Destabilizing | 1.0 | D | 0.774 | deleterious | N | 0.495704465 | None | None | N |
R/N | 0.8685 | likely_pathogenic | 0.8511 | pathogenic | -0.319 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
R/P | 0.9852 | likely_pathogenic | 0.9819 | pathogenic | -0.051 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
R/Q | 0.2157 | likely_benign | 0.1844 | benign | -0.35 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
R/S | 0.8203 | likely_pathogenic | 0.7913 | pathogenic | -1.029 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | N | 0.493214998 | None | None | N |
R/T | 0.57 | likely_pathogenic | 0.5446 | ambiguous | -0.674 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | N | 0.497026094 | None | None | N |
R/V | 0.6746 | likely_pathogenic | 0.6289 | pathogenic | -0.051 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
R/W | 0.4079 | ambiguous | 0.3243 | benign | -0.023 | Destabilizing | 1.0 | D | 0.786 | deleterious | N | 0.504351745 | None | None | N |
R/Y | 0.6515 | likely_pathogenic | 0.5683 | pathogenic | 0.248 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.