Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31878 | 95857;95858;95859 | chr2:178545478;178545477;178545476 | chr2:179410205;179410204;179410203 |
N2AB | 30237 | 90934;90935;90936 | chr2:178545478;178545477;178545476 | chr2:179410205;179410204;179410203 |
N2A | 29310 | 88153;88154;88155 | chr2:178545478;178545477;178545476 | chr2:179410205;179410204;179410203 |
N2B | 22813 | 68662;68663;68664 | chr2:178545478;178545477;178545476 | chr2:179410205;179410204;179410203 |
Novex-1 | 22938 | 69037;69038;69039 | chr2:178545478;178545477;178545476 | chr2:179410205;179410204;179410203 |
Novex-2 | 23005 | 69238;69239;69240 | chr2:178545478;178545477;178545476 | chr2:179410205;179410204;179410203 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs752844593 | -1.201 | 0.001 | N | 0.311 | 0.086 | 0.151104730317 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
D/N | rs752844593 | -1.201 | 0.001 | N | 0.311 | 0.086 | 0.151104730317 | gnomAD-4.0.0 | 3.62726E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.76846E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.189 | likely_benign | 0.1861 | benign | -0.5 | Destabilizing | 0.001 | N | 0.371 | neutral | N | 0.436999143 | None | None | N |
D/C | 0.5228 | ambiguous | 0.5404 | ambiguous | -0.063 | Destabilizing | 0.944 | D | 0.636 | neutral | None | None | None | None | N |
D/E | 0.1299 | likely_benign | 0.1402 | benign | -0.346 | Destabilizing | 0.001 | N | 0.151 | neutral | N | 0.302394288 | None | None | N |
D/F | 0.5039 | ambiguous | 0.5137 | ambiguous | 0.222 | Stabilizing | 0.818 | D | 0.655 | neutral | None | None | None | None | N |
D/G | 0.2755 | likely_benign | 0.2834 | benign | -0.922 | Destabilizing | 0.09 | N | 0.438 | neutral | N | 0.45799049 | None | None | N |
D/H | 0.247 | likely_benign | 0.2501 | benign | -0.033 | Destabilizing | 0.627 | D | 0.583 | neutral | N | 0.49533537 | None | None | N |
D/I | 0.2737 | likely_benign | 0.2825 | benign | 0.647 | Stabilizing | 0.69 | D | 0.631 | neutral | None | None | None | None | N |
D/K | 0.4016 | ambiguous | 0.4329 | ambiguous | -0.168 | Destabilizing | 0.241 | N | 0.469 | neutral | None | None | None | None | N |
D/L | 0.2994 | likely_benign | 0.3211 | benign | 0.647 | Stabilizing | 0.241 | N | 0.572 | neutral | None | None | None | None | N |
D/M | 0.4881 | ambiguous | 0.5162 | ambiguous | 1.151 | Stabilizing | 0.944 | D | 0.629 | neutral | None | None | None | None | N |
D/N | 0.0995 | likely_benign | 0.1078 | benign | -0.76 | Destabilizing | 0.001 | N | 0.311 | neutral | N | 0.437844505 | None | None | N |
D/P | 0.7313 | likely_pathogenic | 0.7293 | pathogenic | 0.29 | Stabilizing | 0.818 | D | 0.555 | neutral | None | None | None | None | N |
D/Q | 0.2743 | likely_benign | 0.2889 | benign | -0.545 | Destabilizing | 0.008 | N | 0.309 | neutral | None | None | None | None | N |
D/R | 0.4335 | ambiguous | 0.4438 | ambiguous | -0.004 | Destabilizing | 0.241 | N | 0.549 | neutral | None | None | None | None | N |
D/S | 0.1146 | likely_benign | 0.1169 | benign | -1.144 | Destabilizing | 0.116 | N | 0.428 | neutral | None | None | None | None | N |
D/T | 0.1986 | likely_benign | 0.2078 | benign | -0.771 | Destabilizing | 0.388 | N | 0.485 | neutral | None | None | None | None | N |
D/V | 0.1877 | likely_benign | 0.1913 | benign | 0.29 | Stabilizing | 0.193 | N | 0.58 | neutral | N | 0.441194241 | None | None | N |
D/W | 0.842 | likely_pathogenic | 0.8502 | pathogenic | 0.478 | Stabilizing | 0.981 | D | 0.666 | neutral | None | None | None | None | N |
D/Y | 0.2124 | likely_benign | 0.2186 | benign | 0.526 | Stabilizing | 0.912 | D | 0.668 | neutral | N | 0.436596498 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.