Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31884 | 95875;95876;95877 | chr2:178545460;178545459;178545458 | chr2:179410187;179410186;179410185 |
N2AB | 30243 | 90952;90953;90954 | chr2:178545460;178545459;178545458 | chr2:179410187;179410186;179410185 |
N2A | 29316 | 88171;88172;88173 | chr2:178545460;178545459;178545458 | chr2:179410187;179410186;179410185 |
N2B | 22819 | 68680;68681;68682 | chr2:178545460;178545459;178545458 | chr2:179410187;179410186;179410185 |
Novex-1 | 22944 | 69055;69056;69057 | chr2:178545460;178545459;178545458 | chr2:179410187;179410186;179410185 |
Novex-2 | 23011 | 69256;69257;69258 | chr2:178545460;178545459;178545458 | chr2:179410187;179410186;179410185 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs977811552 | -0.133 | 0.211 | N | 0.564 | 0.209 | 0.329020015101 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 5.81E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs977811552 | -0.133 | 0.211 | N | 0.564 | 0.209 | 0.329020015101 | gnomAD-4.0.0 | 6.38457E-06 | None | None | None | None | N | None | 0 | 6.86625E-05 | None | 0 | 0 | None | 0 | 0 | 2.87127E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1012 | likely_benign | 0.1007 | benign | -1.326 | Destabilizing | 0.64 | D | 0.729 | prob.delet. | N | 0.421778974 | None | None | N |
T/C | 0.3011 | likely_benign | 0.3091 | benign | -1.484 | Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | N |
T/D | 0.7858 | likely_pathogenic | 0.8024 | pathogenic | -2.538 | Highly Destabilizing | 0.976 | D | 0.776 | deleterious | None | None | None | None | N |
T/E | 0.6179 | likely_pathogenic | 0.6386 | pathogenic | -2.359 | Highly Destabilizing | 0.976 | D | 0.77 | deleterious | None | None | None | None | N |
T/F | 0.3139 | likely_benign | 0.3189 | benign | -1.016 | Destabilizing | 0.988 | D | 0.817 | deleterious | None | None | None | None | N |
T/G | 0.4176 | ambiguous | 0.413 | ambiguous | -1.649 | Destabilizing | 0.851 | D | 0.769 | deleterious | None | None | None | None | N |
T/H | 0.4362 | ambiguous | 0.4208 | ambiguous | -1.626 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
T/I | 0.2668 | likely_benign | 0.281 | benign | -0.494 | Destabilizing | 0.211 | N | 0.564 | neutral | N | 0.45135252 | None | None | N |
T/K | 0.5548 | ambiguous | 0.5149 | ambiguous | -0.959 | Destabilizing | 0.976 | D | 0.773 | deleterious | None | None | None | None | N |
T/L | 0.1442 | likely_benign | 0.1482 | benign | -0.494 | Destabilizing | 0.851 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/M | 0.0931 | likely_benign | 0.0927 | benign | -0.676 | Destabilizing | 0.997 | D | 0.781 | deleterious | None | None | None | None | N |
T/N | 0.2808 | likely_benign | 0.2783 | benign | -1.677 | Destabilizing | 0.968 | D | 0.743 | deleterious | N | 0.474344526 | None | None | N |
T/P | 0.9532 | likely_pathogenic | 0.9435 | pathogenic | -0.745 | Destabilizing | 0.984 | D | 0.793 | deleterious | N | 0.486714789 | None | None | N |
T/Q | 0.4055 | ambiguous | 0.3833 | ambiguous | -1.56 | Destabilizing | 0.988 | D | 0.802 | deleterious | None | None | None | None | N |
T/R | 0.4464 | ambiguous | 0.3904 | ambiguous | -0.963 | Destabilizing | 0.976 | D | 0.797 | deleterious | None | None | None | None | N |
T/S | 0.1247 | likely_benign | 0.1237 | benign | -1.734 | Destabilizing | 0.103 | N | 0.354 | neutral | N | 0.393883084 | None | None | N |
T/V | 0.1827 | likely_benign | 0.1962 | benign | -0.745 | Destabilizing | 0.851 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/W | 0.6544 | likely_pathogenic | 0.6513 | pathogenic | -1.239 | Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | N |
T/Y | 0.3494 | ambiguous | 0.3619 | ambiguous | -0.856 | Destabilizing | 0.996 | D | 0.839 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.