Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31920 | 95983;95984;95985 | chr2:178544471;178544470;178544469 | chr2:179409198;179409197;179409196 |
N2AB | 30279 | 91060;91061;91062 | chr2:178544471;178544470;178544469 | chr2:179409198;179409197;179409196 |
N2A | 29352 | 88279;88280;88281 | chr2:178544471;178544470;178544469 | chr2:179409198;179409197;179409196 |
N2B | 22855 | 68788;68789;68790 | chr2:178544471;178544470;178544469 | chr2:179409198;179409197;179409196 |
Novex-1 | 22980 | 69163;69164;69165 | chr2:178544471;178544470;178544469 | chr2:179409198;179409197;179409196 |
Novex-2 | 23047 | 69364;69365;69366 | chr2:178544471;178544470;178544469 | chr2:179409198;179409197;179409196 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 1.0 | N | 0.706 | 0.472 | 0.346768085243 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8281 | likely_pathogenic | 0.8336 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.514035774 | None | None | N |
D/C | 0.9822 | likely_pathogenic | 0.9829 | pathogenic | 0.051 | Stabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
D/E | 0.7969 | likely_pathogenic | 0.8039 | pathogenic | -0.435 | Destabilizing | 1.0 | D | 0.384 | neutral | N | 0.485521021 | None | None | N |
D/F | 0.9791 | likely_pathogenic | 0.9767 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
D/G | 0.7461 | likely_pathogenic | 0.7832 | pathogenic | -0.727 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | N | 0.519577667 | None | None | N |
D/H | 0.9381 | likely_pathogenic | 0.9315 | pathogenic | -0.636 | Destabilizing | 1.0 | D | 0.609 | neutral | N | 0.491843351 | None | None | N |
D/I | 0.9827 | likely_pathogenic | 0.977 | pathogenic | 0.028 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
D/K | 0.9699 | likely_pathogenic | 0.9674 | pathogenic | 0.187 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
D/L | 0.9616 | likely_pathogenic | 0.9567 | pathogenic | 0.028 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
D/M | 0.9884 | likely_pathogenic | 0.9866 | pathogenic | 0.383 | Stabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
D/N | 0.4617 | ambiguous | 0.4889 | ambiguous | -0.106 | Destabilizing | 1.0 | D | 0.626 | neutral | N | 0.50614701 | None | None | N |
D/P | 0.998 | likely_pathogenic | 0.9974 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
D/Q | 0.9583 | likely_pathogenic | 0.9534 | pathogenic | -0.086 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
D/R | 0.9641 | likely_pathogenic | 0.9591 | pathogenic | 0.219 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
D/S | 0.6528 | likely_pathogenic | 0.6699 | pathogenic | -0.235 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
D/T | 0.9208 | likely_pathogenic | 0.9109 | pathogenic | -0.063 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
D/V | 0.9454 | likely_pathogenic | 0.929 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | N | 0.493044665 | None | None | N |
D/W | 0.9965 | likely_pathogenic | 0.9955 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
D/Y | 0.8763 | likely_pathogenic | 0.8582 | pathogenic | -0.285 | Destabilizing | 1.0 | D | 0.626 | neutral | N | 0.494312113 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.