Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3194 | 9805;9806;9807 | chr2:178766504;178766503;178766502 | chr2:179631231;179631230;179631229 |
N2AB | 3194 | 9805;9806;9807 | chr2:178766504;178766503;178766502 | chr2:179631231;179631230;179631229 |
N2A | 3194 | 9805;9806;9807 | chr2:178766504;178766503;178766502 | chr2:179631231;179631230;179631229 |
N2B | 3148 | 9667;9668;9669 | chr2:178766504;178766503;178766502 | chr2:179631231;179631230;179631229 |
Novex-1 | 3148 | 9667;9668;9669 | chr2:178766504;178766503;178766502 | chr2:179631231;179631230;179631229 |
Novex-2 | 3148 | 9667;9668;9669 | chr2:178766504;178766503;178766502 | chr2:179631231;179631230;179631229 |
Novex-3 | 3194 | 9805;9806;9807 | chr2:178766504;178766503;178766502 | chr2:179631231;179631230;179631229 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | rs1420659953 | -2.253 | 0.523 | N | 0.645 | 0.329 | 0.253205268125 | gnomAD-4.0.0 | 6.84082E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15934E-05 | 0 |
H/R | None | None | 0.523 | N | 0.649 | 0.328 | 0.332133492242 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
H/Y | rs1420659953 | None | 0.001 | N | 0.175 | 0.103 | 0.139678290688 | gnomAD-4.0.0 | 1.36816E-06 | None | None | None | None | N | None | 5.97407E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7165 | likely_pathogenic | 0.8643 | pathogenic | -1.764 | Destabilizing | 0.228 | N | 0.605 | neutral | None | None | None | None | N |
H/C | 0.3435 | ambiguous | 0.4028 | ambiguous | -0.923 | Destabilizing | 0.983 | D | 0.655 | neutral | None | None | None | None | N |
H/D | 0.6957 | likely_pathogenic | 0.8665 | pathogenic | -1.631 | Destabilizing | 0.523 | D | 0.645 | neutral | N | 0.499667311 | None | None | N |
H/E | 0.6683 | likely_pathogenic | 0.8409 | pathogenic | -1.444 | Destabilizing | 0.593 | D | 0.583 | neutral | None | None | None | None | N |
H/F | 0.3692 | ambiguous | 0.449 | ambiguous | 0.181 | Stabilizing | 0.001 | N | 0.339 | neutral | None | None | None | None | N |
H/G | 0.7845 | likely_pathogenic | 0.9018 | pathogenic | -2.193 | Highly Destabilizing | 0.593 | D | 0.626 | neutral | None | None | None | None | N |
H/I | 0.486 | ambiguous | 0.6251 | pathogenic | -0.495 | Destabilizing | 0.418 | N | 0.671 | neutral | None | None | None | None | N |
H/K | 0.7463 | likely_pathogenic | 0.8819 | pathogenic | -1.142 | Destabilizing | 0.418 | N | 0.633 | neutral | None | None | None | None | N |
H/L | 0.2116 | likely_benign | 0.3201 | benign | -0.495 | Destabilizing | 0.101 | N | 0.607 | neutral | N | 0.452576554 | None | None | N |
H/M | 0.6051 | likely_pathogenic | 0.7158 | pathogenic | -0.696 | Destabilizing | 0.94 | D | 0.63 | neutral | None | None | None | None | N |
H/N | 0.2596 | likely_benign | 0.4316 | ambiguous | -1.695 | Destabilizing | 0.523 | D | 0.606 | neutral | N | 0.499531806 | None | None | N |
H/P | 0.7042 | likely_pathogenic | 0.88 | pathogenic | -0.907 | Destabilizing | 0.921 | D | 0.656 | neutral | N | 0.499667311 | None | None | N |
H/Q | 0.4827 | ambiguous | 0.682 | pathogenic | -1.3 | Destabilizing | 0.794 | D | 0.65 | neutral | N | 0.499531806 | None | None | N |
H/R | 0.4943 | ambiguous | 0.7193 | pathogenic | -1.431 | Destabilizing | 0.523 | D | 0.649 | neutral | N | 0.498993076 | None | None | N |
H/S | 0.586 | likely_pathogenic | 0.7676 | pathogenic | -1.814 | Destabilizing | 0.418 | N | 0.605 | neutral | None | None | None | None | N |
H/T | 0.5838 | likely_pathogenic | 0.783 | pathogenic | -1.51 | Destabilizing | 0.593 | D | 0.643 | neutral | None | None | None | None | N |
H/V | 0.4584 | ambiguous | 0.5838 | pathogenic | -0.907 | Destabilizing | 0.418 | N | 0.661 | neutral | None | None | None | None | N |
H/W | 0.4397 | ambiguous | 0.5275 | ambiguous | 0.735 | Stabilizing | 0.836 | D | 0.625 | neutral | None | None | None | None | N |
H/Y | 0.1053 | likely_benign | 0.1573 | benign | 0.534 | Stabilizing | 0.001 | N | 0.175 | neutral | N | 0.360935011 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.