Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31946 | 96061;96062;96063 | chr2:178544393;178544392;178544391 | chr2:179409120;179409119;179409118 |
N2AB | 30305 | 91138;91139;91140 | chr2:178544393;178544392;178544391 | chr2:179409120;179409119;179409118 |
N2A | 29378 | 88357;88358;88359 | chr2:178544393;178544392;178544391 | chr2:179409120;179409119;179409118 |
N2B | 22881 | 68866;68867;68868 | chr2:178544393;178544392;178544391 | chr2:179409120;179409119;179409118 |
Novex-1 | 23006 | 69241;69242;69243 | chr2:178544393;178544392;178544391 | chr2:179409120;179409119;179409118 |
Novex-2 | 23073 | 69442;69443;69444 | chr2:178544393;178544392;178544391 | chr2:179409120;179409119;179409118 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1405729797 | None | 0.198 | N | 0.331 | 0.222 | 0.385578977469 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/V | rs1405729797 | None | 0.198 | N | 0.331 | 0.222 | 0.385578977469 | gnomAD-4.0.0 | 6.5741E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47011E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.799 | likely_pathogenic | 0.8328 | pathogenic | -3.214 | Highly Destabilizing | 0.983 | D | 0.683 | prob.neutral | None | None | None | None | N |
L/C | 0.8456 | likely_pathogenic | 0.8616 | pathogenic | -2.407 | Highly Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
L/D | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -3.702 | Highly Destabilizing | 0.999 | D | 0.886 | deleterious | None | None | None | None | N |
L/E | 0.9936 | likely_pathogenic | 0.9949 | pathogenic | -3.43 | Highly Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
L/F | 0.7177 | likely_pathogenic | 0.7419 | pathogenic | -2.007 | Highly Destabilizing | 0.998 | D | 0.616 | neutral | None | None | None | None | N |
L/G | 0.9852 | likely_pathogenic | 0.9878 | pathogenic | -3.696 | Highly Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
L/H | 0.9909 | likely_pathogenic | 0.9925 | pathogenic | -3.125 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
L/I | 0.0968 | likely_benign | 0.1003 | benign | -1.72 | Destabilizing | 0.923 | D | 0.556 | neutral | None | None | None | None | N |
L/K | 0.9923 | likely_pathogenic | 0.9935 | pathogenic | -2.791 | Highly Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
L/M | 0.2725 | likely_benign | 0.3073 | benign | -1.92 | Destabilizing | 0.997 | D | 0.621 | neutral | N | 0.502920277 | None | None | N |
L/N | 0.9952 | likely_pathogenic | 0.9963 | pathogenic | -3.488 | Highly Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
L/P | 0.9859 | likely_pathogenic | 0.9877 | pathogenic | -2.218 | Highly Destabilizing | 0.999 | D | 0.887 | deleterious | N | 0.481086611 | None | None | N |
L/Q | 0.9814 | likely_pathogenic | 0.9851 | pathogenic | -3.18 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | N | 0.4926075 | None | None | N |
L/R | 0.9845 | likely_pathogenic | 0.9865 | pathogenic | -2.694 | Highly Destabilizing | 0.999 | D | 0.881 | deleterious | N | 0.4926075 | None | None | N |
L/S | 0.9799 | likely_pathogenic | 0.9849 | pathogenic | -3.882 | Highly Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
L/T | 0.8504 | likely_pathogenic | 0.8778 | pathogenic | -3.48 | Highly Destabilizing | 0.983 | D | 0.687 | prob.neutral | None | None | None | None | N |
L/V | 0.0867 | likely_benign | 0.0915 | benign | -2.218 | Highly Destabilizing | 0.198 | N | 0.331 | neutral | N | 0.333535553 | None | None | N |
L/W | 0.9721 | likely_pathogenic | 0.9724 | pathogenic | -2.158 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/Y | 0.9796 | likely_pathogenic | 0.9817 | pathogenic | -2.212 | Highly Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.