Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31980 | 96163;96164;96165 | chr2:178544291;178544290;178544289 | chr2:179409018;179409017;179409016 |
N2AB | 30339 | 91240;91241;91242 | chr2:178544291;178544290;178544289 | chr2:179409018;179409017;179409016 |
N2A | 29412 | 88459;88460;88461 | chr2:178544291;178544290;178544289 | chr2:179409018;179409017;179409016 |
N2B | 22915 | 68968;68969;68970 | chr2:178544291;178544290;178544289 | chr2:179409018;179409017;179409016 |
Novex-1 | 23040 | 69343;69344;69345 | chr2:178544291;178544290;178544289 | chr2:179409018;179409017;179409016 |
Novex-2 | 23107 | 69544;69545;69546 | chr2:178544291;178544290;178544289 | chr2:179409018;179409017;179409016 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1315935878 | -0.645 | 0.999 | N | 0.6 | 0.405 | 0.259272394797 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
K/E | rs1315935878 | -0.645 | 0.999 | N | 0.6 | 0.405 | 0.259272394797 | gnomAD-4.0.0 | 1.59133E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85851E-06 | 0 | 0 |
K/N | None | None | 1.0 | N | 0.735 | 0.306 | 0.143124449307 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2752 | likely_benign | 0.2897 | benign | -0.863 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/C | 0.4641 | ambiguous | 0.5151 | ambiguous | -0.948 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
K/D | 0.623 | likely_pathogenic | 0.6256 | pathogenic | -0.534 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
K/E | 0.1899 | likely_benign | 0.1893 | benign | -0.363 | Destabilizing | 0.999 | D | 0.6 | neutral | N | 0.365925691 | None | None | N |
K/F | 0.6506 | likely_pathogenic | 0.677 | pathogenic | -0.311 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
K/G | 0.3934 | ambiguous | 0.3986 | ambiguous | -1.281 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
K/H | 0.2688 | likely_benign | 0.2889 | benign | -1.501 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
K/I | 0.253 | likely_benign | 0.2699 | benign | 0.257 | Stabilizing | 1.0 | D | 0.813 | deleterious | N | 0.472037223 | None | None | N |
K/L | 0.2784 | likely_benign | 0.3011 | benign | 0.257 | Stabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
K/M | 0.1757 | likely_benign | 0.1774 | benign | 0.022 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
K/N | 0.3575 | ambiguous | 0.3497 | ambiguous | -0.974 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.461780157 | None | None | N |
K/P | 0.4627 | ambiguous | 0.4908 | ambiguous | -0.088 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
K/Q | 0.1198 | likely_benign | 0.1226 | benign | -0.926 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.445426625 | None | None | N |
K/R | 0.0867 | likely_benign | 0.0887 | benign | -0.854 | Destabilizing | 0.999 | D | 0.537 | neutral | N | 0.458606566 | None | None | N |
K/S | 0.3441 | ambiguous | 0.3472 | ambiguous | -1.624 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
K/T | 0.1411 | likely_benign | 0.1432 | benign | -1.228 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.407716386 | None | None | N |
K/V | 0.2408 | likely_benign | 0.2589 | benign | -0.088 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
K/W | 0.6709 | likely_pathogenic | 0.6923 | pathogenic | -0.204 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
K/Y | 0.515 | ambiguous | 0.5352 | ambiguous | 0.086 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.