Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31982 | 96169;96170;96171 | chr2:178544285;178544284;178544283 | chr2:179409012;179409011;179409010 |
N2AB | 30341 | 91246;91247;91248 | chr2:178544285;178544284;178544283 | chr2:179409012;179409011;179409010 |
N2A | 29414 | 88465;88466;88467 | chr2:178544285;178544284;178544283 | chr2:179409012;179409011;179409010 |
N2B | 22917 | 68974;68975;68976 | chr2:178544285;178544284;178544283 | chr2:179409012;179409011;179409010 |
Novex-1 | 23042 | 69349;69350;69351 | chr2:178544285;178544284;178544283 | chr2:179409012;179409011;179409010 |
Novex-2 | 23109 | 69550;69551;69552 | chr2:178544285;178544284;178544283 | chr2:179409012;179409011;179409010 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.602 | N | 0.73 | 0.273 | 0.514587094315 | gnomAD-4.0.0 | 1.36845E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.799E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0742 | likely_benign | 0.0762 | benign | -0.865 | Destabilizing | 0.019 | N | 0.49 | neutral | N | 0.469015561 | None | None | N |
S/C | 0.063 | likely_benign | 0.0644 | benign | -0.39 | Destabilizing | 0.002 | N | 0.611 | neutral | N | 0.476789682 | None | None | N |
S/D | 0.3515 | ambiguous | 0.3632 | ambiguous | -1.446 | Destabilizing | 0.22 | N | 0.691 | prob.neutral | None | None | None | None | N |
S/E | 0.387 | ambiguous | 0.3922 | ambiguous | -1.207 | Destabilizing | 0.055 | N | 0.609 | neutral | None | None | None | None | N |
S/F | 0.1227 | likely_benign | 0.1247 | benign | -0.542 | Destabilizing | 0.602 | D | 0.73 | prob.delet. | N | 0.441156956 | None | None | N |
S/G | 0.0921 | likely_benign | 0.0947 | benign | -1.28 | Destabilizing | 0.104 | N | 0.609 | neutral | None | None | None | None | N |
S/H | 0.142 | likely_benign | 0.1407 | benign | -1.46 | Destabilizing | 0.667 | D | 0.732 | prob.delet. | None | None | None | None | N |
S/I | 0.0862 | likely_benign | 0.0876 | benign | 0.217 | Stabilizing | 0.497 | N | 0.754 | deleterious | None | None | None | None | N |
S/K | 0.2708 | likely_benign | 0.2726 | benign | 0.019 | Stabilizing | 0.055 | N | 0.619 | neutral | None | None | None | None | N |
S/L | 0.0738 | likely_benign | 0.0753 | benign | 0.217 | Stabilizing | 0.055 | N | 0.712 | prob.delet. | None | None | None | None | N |
S/M | 0.1398 | likely_benign | 0.1497 | benign | -0.039 | Destabilizing | 0.667 | D | 0.732 | prob.delet. | None | None | None | None | N |
S/N | 0.0947 | likely_benign | 0.1004 | benign | -0.755 | Destabilizing | 0.22 | N | 0.679 | prob.neutral | None | None | None | None | N |
S/P | 0.8997 | likely_pathogenic | 0.8812 | pathogenic | -0.111 | Destabilizing | 0.602 | D | 0.777 | deleterious | N | 0.469700171 | None | None | N |
S/Q | 0.2516 | likely_benign | 0.2477 | benign | -0.403 | Destabilizing | 0.004 | N | 0.527 | neutral | None | None | None | None | N |
S/R | 0.1891 | likely_benign | 0.1814 | benign | -0.493 | Destabilizing | None | N | 0.436 | neutral | None | None | None | None | N |
S/T | 0.0693 | likely_benign | 0.0727 | benign | -0.395 | Destabilizing | 0.001 | N | 0.291 | neutral | N | 0.425645999 | None | None | N |
S/V | 0.1061 | likely_benign | 0.1088 | benign | -0.111 | Destabilizing | 0.124 | N | 0.731 | prob.delet. | None | None | None | None | N |
S/W | 0.2524 | likely_benign | 0.2336 | benign | -0.872 | Destabilizing | 0.958 | D | 0.767 | deleterious | None | None | None | None | N |
S/Y | 0.1084 | likely_benign | 0.1042 | benign | -0.388 | Destabilizing | 0.822 | D | 0.729 | prob.delet. | N | 0.439906162 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.