Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31986 | 96181;96182;96183 | chr2:178544273;178544272;178544271 | chr2:179409000;179408999;179408998 |
N2AB | 30345 | 91258;91259;91260 | chr2:178544273;178544272;178544271 | chr2:179409000;179408999;179408998 |
N2A | 29418 | 88477;88478;88479 | chr2:178544273;178544272;178544271 | chr2:179409000;179408999;179408998 |
N2B | 22921 | 68986;68987;68988 | chr2:178544273;178544272;178544271 | chr2:179409000;179408999;179408998 |
Novex-1 | 23046 | 69361;69362;69363 | chr2:178544273;178544272;178544271 | chr2:179409000;179408999;179408998 |
Novex-2 | 23113 | 69562;69563;69564 | chr2:178544273;178544272;178544271 | chr2:179409000;179408999;179408998 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 1.0 | N | 0.652 | 0.419 | 0.497679007273 | gnomAD-4.0.0 | 1.59134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85861E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5064 | ambiguous | 0.4957 | ambiguous | -1.313 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
A/D | 0.9419 | likely_pathogenic | 0.9422 | pathogenic | -2.723 | Highly Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.472649459 | None | None | N |
A/E | 0.8758 | likely_pathogenic | 0.8708 | pathogenic | -2.458 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
A/F | 0.7221 | likely_pathogenic | 0.6991 | pathogenic | -0.624 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
A/G | 0.2043 | likely_benign | 0.2131 | benign | -1.807 | Destabilizing | 1.0 | D | 0.605 | neutral | N | 0.473156438 | None | None | N |
A/H | 0.8801 | likely_pathogenic | 0.8659 | pathogenic | -2.26 | Highly Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
A/I | 0.657 | likely_pathogenic | 0.6634 | pathogenic | 0.164 | Stabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
A/K | 0.8921 | likely_pathogenic | 0.88 | pathogenic | -1.206 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
A/L | 0.5344 | ambiguous | 0.511 | ambiguous | 0.164 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
A/M | 0.5025 | ambiguous | 0.4908 | ambiguous | -0.314 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
A/N | 0.8218 | likely_pathogenic | 0.8204 | pathogenic | -1.715 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
A/P | 0.9929 | likely_pathogenic | 0.9929 | pathogenic | -0.279 | Destabilizing | 1.0 | D | 0.809 | deleterious | N | 0.484766233 | None | None | N |
A/Q | 0.7712 | likely_pathogenic | 0.7543 | pathogenic | -1.385 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
A/R | 0.8138 | likely_pathogenic | 0.7916 | pathogenic | -1.465 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
A/S | 0.1664 | likely_benign | 0.1713 | benign | -2.081 | Highly Destabilizing | 1.0 | D | 0.597 | neutral | N | 0.394037799 | None | None | N |
A/T | 0.2649 | likely_benign | 0.2654 | benign | -1.685 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | N | 0.451891237 | None | None | N |
A/V | 0.3661 | ambiguous | 0.3692 | ambiguous | -0.279 | Destabilizing | 1.0 | D | 0.652 | neutral | N | 0.449005648 | None | None | N |
A/W | 0.9541 | likely_pathogenic | 0.9473 | pathogenic | -1.477 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
A/Y | 0.8382 | likely_pathogenic | 0.8136 | pathogenic | -0.952 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.