Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3202 | 9829;9830;9831 | chr2:178766480;178766479;178766478 | chr2:179631207;179631206;179631205 |
N2AB | 3202 | 9829;9830;9831 | chr2:178766480;178766479;178766478 | chr2:179631207;179631206;179631205 |
N2A | 3202 | 9829;9830;9831 | chr2:178766480;178766479;178766478 | chr2:179631207;179631206;179631205 |
N2B | 3156 | 9691;9692;9693 | chr2:178766480;178766479;178766478 | chr2:179631207;179631206;179631205 |
Novex-1 | 3156 | 9691;9692;9693 | chr2:178766480;178766479;178766478 | chr2:179631207;179631206;179631205 |
Novex-2 | 3156 | 9691;9692;9693 | chr2:178766480;178766479;178766478 | chr2:179631207;179631206;179631205 |
Novex-3 | 3202 | 9829;9830;9831 | chr2:178766480;178766479;178766478 | chr2:179631207;179631206;179631205 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.934 | N | 0.488 | 0.346 | 0.576839456108 | gnomAD-4.0.0 | 1.59055E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85656E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9119 | likely_pathogenic | 0.889 | pathogenic | -2.329 | Highly Destabilizing | 0.525 | D | 0.471 | neutral | None | None | None | None | N |
I/C | 0.9397 | likely_pathogenic | 0.9243 | pathogenic | -1.372 | Destabilizing | 0.998 | D | 0.507 | neutral | None | None | None | None | N |
I/D | 0.9813 | likely_pathogenic | 0.9783 | pathogenic | -2.608 | Highly Destabilizing | 0.991 | D | 0.639 | neutral | None | None | None | None | N |
I/E | 0.9329 | likely_pathogenic | 0.9185 | pathogenic | -2.536 | Highly Destabilizing | 0.974 | D | 0.621 | neutral | None | None | None | None | N |
I/F | 0.45 | ambiguous | 0.467 | ambiguous | -1.527 | Destabilizing | 0.934 | D | 0.457 | neutral | N | 0.49710086 | None | None | N |
I/G | 0.971 | likely_pathogenic | 0.9673 | pathogenic | -2.716 | Highly Destabilizing | 0.974 | D | 0.608 | neutral | None | None | None | None | N |
I/H | 0.8529 | likely_pathogenic | 0.8475 | pathogenic | -2.118 | Highly Destabilizing | 0.998 | D | 0.606 | neutral | None | None | None | None | N |
I/K | 0.7775 | likely_pathogenic | 0.7562 | pathogenic | -1.893 | Destabilizing | 0.974 | D | 0.614 | neutral | None | None | None | None | N |
I/L | 0.2723 | likely_benign | 0.2688 | benign | -1.266 | Destabilizing | 0.005 | N | 0.092 | neutral | N | 0.472097107 | None | None | N |
I/M | 0.2813 | likely_benign | 0.2831 | benign | -0.937 | Destabilizing | 0.934 | D | 0.488 | neutral | N | 0.506055392 | None | None | N |
I/N | 0.7302 | likely_pathogenic | 0.73 | pathogenic | -1.812 | Destabilizing | 0.989 | D | 0.647 | neutral | N | 0.50985534 | None | None | N |
I/P | 0.9963 | likely_pathogenic | 0.9954 | pathogenic | -1.597 | Destabilizing | 0.991 | D | 0.64 | neutral | None | None | None | None | N |
I/Q | 0.8411 | likely_pathogenic | 0.8185 | pathogenic | -1.927 | Destabilizing | 0.991 | D | 0.632 | neutral | None | None | None | None | N |
I/R | 0.7132 | likely_pathogenic | 0.7033 | pathogenic | -1.28 | Destabilizing | 0.991 | D | 0.647 | neutral | None | None | None | None | N |
I/S | 0.838 | likely_pathogenic | 0.8243 | pathogenic | -2.339 | Highly Destabilizing | 0.966 | D | 0.593 | neutral | N | 0.507914253 | None | None | N |
I/T | 0.7282 | likely_pathogenic | 0.6733 | pathogenic | -2.169 | Highly Destabilizing | 0.801 | D | 0.503 | neutral | N | 0.450821427 | None | None | N |
I/V | 0.1688 | likely_benign | 0.1527 | benign | -1.597 | Destabilizing | 0.002 | N | 0.114 | neutral | N | 0.422329814 | None | None | N |
I/W | 0.9149 | likely_pathogenic | 0.9246 | pathogenic | -1.808 | Destabilizing | 0.998 | D | 0.663 | neutral | None | None | None | None | N |
I/Y | 0.765 | likely_pathogenic | 0.7685 | pathogenic | -1.614 | Destabilizing | 0.991 | D | 0.545 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.