Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32025 | 96298;96299;96300 | chr2:178544071;178544070;178544069 | chr2:179408798;179408797;179408796 |
N2AB | 30384 | 91375;91376;91377 | chr2:178544071;178544070;178544069 | chr2:179408798;179408797;179408796 |
N2A | 29457 | 88594;88595;88596 | chr2:178544071;178544070;178544069 | chr2:179408798;179408797;179408796 |
N2B | 22960 | 69103;69104;69105 | chr2:178544071;178544070;178544069 | chr2:179408798;179408797;179408796 |
Novex-1 | 23085 | 69478;69479;69480 | chr2:178544071;178544070;178544069 | chr2:179408798;179408797;179408796 |
Novex-2 | 23152 | 69679;69680;69681 | chr2:178544071;178544070;178544069 | chr2:179408798;179408797;179408796 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1259754105 | None | None | N | 0.194 | 0.1 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1259754105 | None | None | N | 0.194 | 0.1 | None | gnomAD-4.0.0 | 3.84548E-06 | None | None | None | None | N | None | 3.38387E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.34073E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0956 | likely_benign | 0.101 | benign | -0.648 | Destabilizing | 0.027 | N | 0.295 | neutral | N | 0.484958768 | None | None | N |
T/C | 0.2797 | likely_benign | 0.3069 | benign | -0.425 | Destabilizing | 0.001 | N | 0.235 | neutral | None | None | None | None | N |
T/D | 0.6905 | likely_pathogenic | 0.6891 | pathogenic | 0.368 | Stabilizing | 0.555 | D | 0.385 | neutral | None | None | None | None | N |
T/E | 0.5789 | likely_pathogenic | 0.5852 | pathogenic | 0.402 | Stabilizing | 0.555 | D | 0.378 | neutral | None | None | None | None | N |
T/F | 0.2834 | likely_benign | 0.3054 | benign | -0.709 | Destabilizing | 0.38 | N | 0.371 | neutral | None | None | None | None | N |
T/G | 0.3356 | likely_benign | 0.3711 | ambiguous | -0.917 | Destabilizing | 0.262 | N | 0.361 | neutral | None | None | None | None | N |
T/H | 0.3849 | ambiguous | 0.3891 | ambiguous | -1.02 | Destabilizing | 0.935 | D | 0.367 | neutral | None | None | None | None | N |
T/I | 0.1119 | likely_benign | 0.1209 | benign | -0.019 | Destabilizing | None | N | 0.194 | neutral | N | 0.475686109 | None | None | N |
T/K | 0.4729 | ambiguous | 0.4693 | ambiguous | -0.354 | Destabilizing | 0.555 | D | 0.381 | neutral | None | None | None | None | N |
T/L | 0.1006 | likely_benign | 0.1082 | benign | -0.019 | Destabilizing | 0.012 | N | 0.344 | neutral | None | None | None | None | N |
T/M | 0.0835 | likely_benign | 0.0877 | benign | -0.053 | Destabilizing | 0.38 | N | 0.382 | neutral | None | None | None | None | N |
T/N | 0.1498 | likely_benign | 0.1585 | benign | -0.423 | Destabilizing | 0.741 | D | 0.333 | neutral | N | 0.52032232 | None | None | N |
T/P | 0.2375 | likely_benign | 0.2484 | benign | -0.196 | Destabilizing | 0.741 | D | 0.395 | neutral | N | 0.512510452 | None | None | N |
T/Q | 0.3626 | ambiguous | 0.3677 | ambiguous | -0.447 | Destabilizing | 0.791 | D | 0.379 | neutral | None | None | None | None | N |
T/R | 0.4179 | ambiguous | 0.4207 | ambiguous | -0.234 | Destabilizing | 0.555 | D | 0.383 | neutral | None | None | None | None | N |
T/S | 0.1373 | likely_benign | 0.151 | benign | -0.766 | Destabilizing | 0.211 | N | 0.25 | neutral | N | 0.499696332 | None | None | N |
T/V | 0.0929 | likely_benign | 0.1003 | benign | -0.196 | Destabilizing | 0.001 | N | 0.119 | neutral | None | None | None | None | N |
T/W | 0.6944 | likely_pathogenic | 0.7045 | pathogenic | -0.696 | Destabilizing | 0.935 | D | 0.419 | neutral | None | None | None | None | N |
T/Y | 0.3423 | ambiguous | 0.3571 | ambiguous | -0.407 | Destabilizing | 0.555 | D | 0.378 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.