Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32042 | 96349;96350;96351 | chr2:178544020;178544019;178544018 | chr2:179408747;179408746;179408745 |
N2AB | 30401 | 91426;91427;91428 | chr2:178544020;178544019;178544018 | chr2:179408747;179408746;179408745 |
N2A | 29474 | 88645;88646;88647 | chr2:178544020;178544019;178544018 | chr2:179408747;179408746;179408745 |
N2B | 22977 | 69154;69155;69156 | chr2:178544020;178544019;178544018 | chr2:179408747;179408746;179408745 |
Novex-1 | 23102 | 69529;69530;69531 | chr2:178544020;178544019;178544018 | chr2:179408747;179408746;179408745 |
Novex-2 | 23169 | 69730;69731;69732 | chr2:178544020;178544019;178544018 | chr2:179408747;179408746;179408745 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs879110168 | None | 0.946 | D | 0.712 | 0.676 | None | gnomAD-4.0.0 | 2.73713E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69857E-06 | 0 | 1.65678E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.8877 | likely_pathogenic | 0.8332 | pathogenic | -0.646 | Destabilizing | 0.716 | D | 0.536 | neutral | D | 0.575610126 | None | None | N |
P/C | 0.9859 | likely_pathogenic | 0.9777 | pathogenic | -0.538 | Destabilizing | 0.994 | D | 0.765 | deleterious | None | None | None | None | N |
P/D | 0.9736 | likely_pathogenic | 0.9631 | pathogenic | -0.611 | Destabilizing | 0.959 | D | 0.697 | prob.neutral | None | None | None | None | N |
P/E | 0.9677 | likely_pathogenic | 0.949 | pathogenic | -0.733 | Destabilizing | 0.921 | D | 0.705 | prob.neutral | None | None | None | None | N |
P/F | 0.9855 | likely_pathogenic | 0.9768 | pathogenic | -0.89 | Destabilizing | 0.994 | D | 0.775 | deleterious | None | None | None | None | N |
P/G | 0.9717 | likely_pathogenic | 0.9617 | pathogenic | -0.786 | Destabilizing | 0.769 | D | 0.656 | neutral | None | None | None | None | N |
P/H | 0.941 | likely_pathogenic | 0.913 | pathogenic | -0.409 | Destabilizing | 0.994 | D | 0.729 | prob.delet. | None | None | None | None | N |
P/I | 0.9019 | likely_pathogenic | 0.8535 | pathogenic | -0.424 | Destabilizing | 0.959 | D | 0.737 | prob.delet. | None | None | None | None | N |
P/K | 0.9591 | likely_pathogenic | 0.9437 | pathogenic | -0.603 | Destabilizing | 0.921 | D | 0.703 | prob.neutral | None | None | None | None | N |
P/L | 0.8182 | likely_pathogenic | 0.7311 | pathogenic | -0.424 | Destabilizing | 0.946 | D | 0.712 | prob.delet. | D | 0.640799013 | None | None | N |
P/M | 0.9421 | likely_pathogenic | 0.9098 | pathogenic | -0.353 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
P/N | 0.9587 | likely_pathogenic | 0.9458 | pathogenic | -0.244 | Destabilizing | 0.921 | D | 0.675 | neutral | None | None | None | None | N |
P/Q | 0.9381 | likely_pathogenic | 0.9085 | pathogenic | -0.533 | Destabilizing | 0.946 | D | 0.706 | prob.neutral | D | 0.575610126 | None | None | N |
P/R | 0.938 | likely_pathogenic | 0.9142 | pathogenic | -0.023 | Destabilizing | 0.946 | D | 0.706 | prob.neutral | D | 0.649914155 | None | None | N |
P/S | 0.9471 | likely_pathogenic | 0.9152 | pathogenic | -0.561 | Destabilizing | 0.035 | N | 0.353 | neutral | D | 0.581851096 | None | None | N |
P/T | 0.8849 | likely_pathogenic | 0.8276 | pathogenic | -0.591 | Destabilizing | 0.898 | D | 0.708 | prob.delet. | D | 0.633894794 | None | None | N |
P/V | 0.8788 | likely_pathogenic | 0.8276 | pathogenic | -0.463 | Destabilizing | 0.959 | D | 0.676 | prob.neutral | None | None | None | None | N |
P/W | 0.9951 | likely_pathogenic | 0.9919 | pathogenic | -0.967 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
P/Y | 0.9793 | likely_pathogenic | 0.9691 | pathogenic | -0.683 | Destabilizing | 0.998 | D | 0.774 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.