Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32046 | 96361;96362;96363 | chr2:178544008;178544007;178544006 | chr2:179408735;179408734;179408733 |
N2AB | 30405 | 91438;91439;91440 | chr2:178544008;178544007;178544006 | chr2:179408735;179408734;179408733 |
N2A | 29478 | 88657;88658;88659 | chr2:178544008;178544007;178544006 | chr2:179408735;179408734;179408733 |
N2B | 22981 | 69166;69167;69168 | chr2:178544008;178544007;178544006 | chr2:179408735;179408734;179408733 |
Novex-1 | 23106 | 69541;69542;69543 | chr2:178544008;178544007;178544006 | chr2:179408735;179408734;179408733 |
Novex-2 | 23173 | 69742;69743;69744 | chr2:178544008;178544007;178544006 | chr2:179408735;179408734;179408733 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.892 | D | 0.796 | 0.687 | 0.804337889494 | gnomAD-4.0.0 | 1.59152E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
I/V | None | None | 0.011 | N | 0.195 | 0.087 | 0.360565625551 | gnomAD-4.0.0 | 1.59151E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85876E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7881 | likely_pathogenic | 0.7863 | pathogenic | -1.734 | Destabilizing | 0.845 | D | 0.723 | prob.delet. | None | None | None | None | N |
I/C | 0.8085 | likely_pathogenic | 0.8218 | pathogenic | -0.956 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
I/D | 0.9924 | likely_pathogenic | 0.9915 | pathogenic | -1.145 | Destabilizing | 0.996 | D | 0.866 | deleterious | None | None | None | None | N |
I/E | 0.9775 | likely_pathogenic | 0.9759 | pathogenic | -1.078 | Destabilizing | 0.987 | D | 0.866 | deleterious | None | None | None | None | N |
I/F | 0.4229 | ambiguous | 0.4359 | ambiguous | -1.081 | Destabilizing | 0.975 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/G | 0.964 | likely_pathogenic | 0.9646 | pathogenic | -2.127 | Highly Destabilizing | 0.987 | D | 0.859 | deleterious | None | None | None | None | N |
I/H | 0.9514 | likely_pathogenic | 0.9524 | pathogenic | -1.383 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
I/K | 0.9246 | likely_pathogenic | 0.9227 | pathogenic | -1.164 | Destabilizing | 0.983 | D | 0.867 | deleterious | D | 0.561274398 | None | None | N |
I/L | 0.1776 | likely_benign | 0.1777 | benign | -0.697 | Destabilizing | 0.426 | N | 0.479 | neutral | N | 0.497500978 | None | None | N |
I/M | 0.1878 | likely_benign | 0.1916 | benign | -0.526 | Destabilizing | 0.983 | D | 0.698 | prob.neutral | D | 0.531306859 | None | None | N |
I/N | 0.8858 | likely_pathogenic | 0.8775 | pathogenic | -1.07 | Destabilizing | 0.996 | D | 0.862 | deleterious | None | None | None | None | N |
I/P | 0.9512 | likely_pathogenic | 0.9509 | pathogenic | -1.012 | Destabilizing | 0.996 | D | 0.866 | deleterious | None | None | None | None | N |
I/Q | 0.9318 | likely_pathogenic | 0.9316 | pathogenic | -1.142 | Destabilizing | 0.996 | D | 0.873 | deleterious | None | None | None | None | N |
I/R | 0.9021 | likely_pathogenic | 0.9015 | pathogenic | -0.691 | Destabilizing | 0.983 | D | 0.867 | deleterious | D | 0.561274398 | None | None | N |
I/S | 0.8511 | likely_pathogenic | 0.8491 | pathogenic | -1.737 | Destabilizing | 0.975 | D | 0.845 | deleterious | None | None | None | None | N |
I/T | 0.6779 | likely_pathogenic | 0.6823 | pathogenic | -1.542 | Destabilizing | 0.892 | D | 0.796 | deleterious | D | 0.526533919 | None | None | N |
I/V | 0.0877 | likely_benign | 0.0895 | benign | -1.012 | Destabilizing | 0.011 | N | 0.195 | neutral | N | 0.418898958 | None | None | N |
I/W | 0.9608 | likely_pathogenic | 0.9633 | pathogenic | -1.249 | Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
I/Y | 0.8835 | likely_pathogenic | 0.885 | pathogenic | -0.986 | Destabilizing | 0.987 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.