Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32051 | 96376;96377;96378 | chr2:178543993;178543992;178543991 | chr2:179408720;179408719;179408718 |
N2AB | 30410 | 91453;91454;91455 | chr2:178543993;178543992;178543991 | chr2:179408720;179408719;179408718 |
N2A | 29483 | 88672;88673;88674 | chr2:178543993;178543992;178543991 | chr2:179408720;179408719;179408718 |
N2B | 22986 | 69181;69182;69183 | chr2:178543993;178543992;178543991 | chr2:179408720;179408719;179408718 |
Novex-1 | 23111 | 69556;69557;69558 | chr2:178543993;178543992;178543991 | chr2:179408720;179408719;179408718 |
Novex-2 | 23178 | 69757;69758;69759 | chr2:178543993;178543992;178543991 | chr2:179408720;179408719;179408718 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs767383259 | 0.483 | 0.012 | N | 0.225 | 0.122 | 0.148003135375 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.0914 | likely_benign | 0.0907 | benign | -0.089 | Destabilizing | 0.007 | N | 0.259 | neutral | None | None | None | None | N |
Q/C | 0.4416 | ambiguous | 0.4381 | ambiguous | -0.23 | Destabilizing | 0.864 | D | 0.359 | neutral | None | None | None | None | N |
Q/D | 0.1546 | likely_benign | 0.1454 | benign | -0.253 | Destabilizing | 0.016 | N | 0.19 | neutral | None | None | None | None | N |
Q/E | 0.0633 | likely_benign | 0.0595 | benign | -0.314 | Destabilizing | None | N | 0.153 | neutral | N | 0.343056327 | None | None | N |
Q/F | 0.5259 | ambiguous | 0.5049 | ambiguous | -0.536 | Destabilizing | 0.628 | D | 0.405 | neutral | None | None | None | None | N |
Q/G | 0.1455 | likely_benign | 0.1312 | benign | -0.17 | Destabilizing | 0.031 | N | 0.324 | neutral | None | None | None | None | N |
Q/H | 0.1269 | likely_benign | 0.1282 | benign | 0.058 | Stabilizing | 0.295 | N | 0.235 | neutral | N | 0.474178159 | None | None | N |
Q/I | 0.2474 | likely_benign | 0.2373 | benign | 0.026 | Stabilizing | 0.072 | N | 0.489 | neutral | None | None | None | None | N |
Q/K | 0.0598 | likely_benign | 0.0564 | benign | -0.089 | Destabilizing | None | N | 0.117 | neutral | N | 0.409742678 | None | None | N |
Q/L | 0.1037 | likely_benign | 0.1019 | benign | 0.026 | Stabilizing | 0.024 | N | 0.325 | neutral | N | 0.423442694 | None | None | N |
Q/M | 0.218 | likely_benign | 0.2118 | benign | -0.039 | Destabilizing | 0.628 | D | 0.239 | neutral | None | None | None | None | N |
Q/N | 0.1275 | likely_benign | 0.1245 | benign | -0.33 | Destabilizing | 0.031 | N | 0.219 | neutral | None | None | None | None | N |
Q/P | 0.0535 | likely_benign | 0.0562 | benign | 0.01 | Stabilizing | None | N | 0.157 | neutral | N | 0.390079482 | None | None | N |
Q/R | 0.0899 | likely_benign | 0.0832 | benign | 0.128 | Stabilizing | 0.012 | N | 0.225 | neutral | N | 0.436659921 | None | None | N |
Q/S | 0.1036 | likely_benign | 0.1036 | benign | -0.308 | Destabilizing | 0.007 | N | 0.191 | neutral | None | None | None | None | N |
Q/T | 0.0951 | likely_benign | 0.098 | benign | -0.259 | Destabilizing | None | N | 0.144 | neutral | None | None | None | None | N |
Q/V | 0.1475 | likely_benign | 0.1404 | benign | 0.01 | Stabilizing | 0.031 | N | 0.331 | neutral | None | None | None | None | N |
Q/W | 0.4678 | ambiguous | 0.4267 | ambiguous | -0.628 | Destabilizing | 0.864 | D | 0.361 | neutral | None | None | None | None | N |
Q/Y | 0.3284 | likely_benign | 0.3073 | benign | -0.333 | Destabilizing | 0.356 | N | 0.355 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.