Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32059 | 96400;96401;96402 | chr2:178543969;178543968;178543967 | chr2:179408696;179408695;179408694 |
N2AB | 30418 | 91477;91478;91479 | chr2:178543969;178543968;178543967 | chr2:179408696;179408695;179408694 |
N2A | 29491 | 88696;88697;88698 | chr2:178543969;178543968;178543967 | chr2:179408696;179408695;179408694 |
N2B | 22994 | 69205;69206;69207 | chr2:178543969;178543968;178543967 | chr2:179408696;179408695;179408694 |
Novex-1 | 23119 | 69580;69581;69582 | chr2:178543969;178543968;178543967 | chr2:179408696;179408695;179408694 |
Novex-2 | 23186 | 69781;69782;69783 | chr2:178543969;178543968;178543967 | chr2:179408696;179408695;179408694 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/E | rs769741768 | -0.674 | 0.984 | D | 0.607 | 0.376 | 0.603512723014 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
A/E | rs769741768 | -0.674 | 0.984 | D | 0.607 | 0.376 | 0.603512723014 | gnomAD-4.0.0 | 4.77427E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71742E-06 | 0 | 3.02517E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5762 | likely_pathogenic | 0.5498 | ambiguous | -0.914 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | N |
A/D | 0.9735 | likely_pathogenic | 0.9711 | pathogenic | -0.808 | Destabilizing | 0.988 | D | 0.646 | neutral | None | None | None | None | N |
A/E | 0.9689 | likely_pathogenic | 0.9661 | pathogenic | -0.798 | Destabilizing | 0.984 | D | 0.607 | neutral | D | 0.532366111 | None | None | N |
A/F | 0.9032 | likely_pathogenic | 0.8869 | pathogenic | -0.676 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | N |
A/G | 0.1429 | likely_benign | 0.1267 | benign | -0.946 | Destabilizing | 0.004 | N | 0.231 | neutral | N | 0.471779012 | None | None | N |
A/H | 0.9711 | likely_pathogenic | 0.9686 | pathogenic | -1.189 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | N |
A/I | 0.8197 | likely_pathogenic | 0.7912 | pathogenic | 0.001 | Stabilizing | 0.996 | D | 0.649 | neutral | None | None | None | None | N |
A/K | 0.9883 | likely_pathogenic | 0.9871 | pathogenic | -1.076 | Destabilizing | 0.988 | D | 0.613 | neutral | None | None | None | None | N |
A/L | 0.7717 | likely_pathogenic | 0.746 | pathogenic | 0.001 | Stabilizing | 0.959 | D | 0.555 | neutral | None | None | None | None | N |
A/M | 0.8009 | likely_pathogenic | 0.7794 | pathogenic | -0.163 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
A/N | 0.9283 | likely_pathogenic | 0.9206 | pathogenic | -0.934 | Destabilizing | 0.976 | D | 0.671 | neutral | None | None | None | None | N |
A/P | 0.9772 | likely_pathogenic | 0.974 | pathogenic | -0.172 | Destabilizing | 0.995 | D | 0.639 | neutral | N | 0.497088768 | None | None | N |
A/Q | 0.9563 | likely_pathogenic | 0.9537 | pathogenic | -0.974 | Destabilizing | 0.996 | D | 0.657 | neutral | None | None | None | None | N |
A/R | 0.9742 | likely_pathogenic | 0.9716 | pathogenic | -0.883 | Destabilizing | 0.988 | D | 0.649 | neutral | None | None | None | None | N |
A/S | 0.2175 | likely_benign | 0.2123 | benign | -1.325 | Destabilizing | 0.896 | D | 0.503 | neutral | D | 0.531846036 | None | None | N |
A/T | 0.3966 | ambiguous | 0.4071 | ambiguous | -1.199 | Destabilizing | 0.946 | D | 0.457 | neutral | N | 0.516857941 | None | None | N |
A/V | 0.4974 | ambiguous | 0.4669 | ambiguous | -0.172 | Destabilizing | 0.946 | D | 0.467 | neutral | N | 0.466754407 | None | None | N |
A/W | 0.9844 | likely_pathogenic | 0.9813 | pathogenic | -1.105 | Destabilizing | 0.999 | D | 0.726 | prob.delet. | None | None | None | None | N |
A/Y | 0.9372 | likely_pathogenic | 0.9269 | pathogenic | -0.634 | Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.