Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32060 | 96403;96404;96405 | chr2:178543966;178543965;178543964 | chr2:179408693;179408692;179408691 |
N2AB | 30419 | 91480;91481;91482 | chr2:178543966;178543965;178543964 | chr2:179408693;179408692;179408691 |
N2A | 29492 | 88699;88700;88701 | chr2:178543966;178543965;178543964 | chr2:179408693;179408692;179408691 |
N2B | 22995 | 69208;69209;69210 | chr2:178543966;178543965;178543964 | chr2:179408693;179408692;179408691 |
Novex-1 | 23120 | 69583;69584;69585 | chr2:178543966;178543965;178543964 | chr2:179408693;179408692;179408691 |
Novex-2 | 23187 | 69784;69785;69786 | chr2:178543966;178543965;178543964 | chr2:179408693;179408692;179408691 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 0.784 | N | 0.397 | 0.248 | 0.698813973971 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3206 | likely_benign | 0.2765 | benign | -0.99 | Destabilizing | 0.495 | N | 0.353 | neutral | None | None | None | None | N |
I/C | 0.6589 | likely_pathogenic | 0.6018 | pathogenic | -0.809 | Destabilizing | 0.995 | D | 0.404 | neutral | None | None | None | None | N |
I/D | 0.6859 | likely_pathogenic | 0.6207 | pathogenic | -0.364 | Destabilizing | 0.981 | D | 0.473 | neutral | None | None | None | None | N |
I/E | 0.5947 | likely_pathogenic | 0.5377 | ambiguous | -0.392 | Destabilizing | 0.944 | D | 0.476 | neutral | None | None | None | None | N |
I/F | 0.1415 | likely_benign | 0.1265 | benign | -0.642 | Destabilizing | 0.006 | N | 0.177 | neutral | N | 0.486689749 | None | None | N |
I/G | 0.6153 | likely_pathogenic | 0.543 | ambiguous | -1.244 | Destabilizing | 0.828 | D | 0.434 | neutral | None | None | None | None | N |
I/H | 0.4523 | ambiguous | 0.3962 | ambiguous | -0.387 | Destabilizing | 0.893 | D | 0.455 | neutral | None | None | None | None | N |
I/K | 0.4455 | ambiguous | 0.3818 | ambiguous | -0.69 | Destabilizing | 0.828 | D | 0.463 | neutral | None | None | None | None | N |
I/L | 0.1097 | likely_benign | 0.1013 | benign | -0.401 | Destabilizing | 0.002 | N | 0.127 | neutral | N | 0.46437025 | None | None | N |
I/M | 0.0902 | likely_benign | 0.0829 | benign | -0.501 | Destabilizing | 0.139 | N | 0.217 | neutral | N | 0.507353023 | None | None | N |
I/N | 0.2548 | likely_benign | 0.2088 | benign | -0.572 | Destabilizing | 0.975 | D | 0.472 | neutral | N | 0.449862157 | None | None | N |
I/P | 0.9323 | likely_pathogenic | 0.8948 | pathogenic | -0.564 | Destabilizing | 0.981 | D | 0.473 | neutral | None | None | None | None | N |
I/Q | 0.4087 | ambiguous | 0.3619 | ambiguous | -0.718 | Destabilizing | 0.944 | D | 0.465 | neutral | None | None | None | None | N |
I/R | 0.3544 | ambiguous | 0.2881 | benign | -0.146 | Destabilizing | 0.944 | D | 0.468 | neutral | None | None | None | None | N |
I/S | 0.2813 | likely_benign | 0.2389 | benign | -1.113 | Destabilizing | 0.784 | D | 0.397 | neutral | N | 0.441608034 | None | None | N |
I/T | 0.283 | likely_benign | 0.2431 | benign | -1.021 | Destabilizing | 0.642 | D | 0.355 | neutral | N | 0.465004968 | None | None | N |
I/V | 0.0728 | likely_benign | 0.0676 | benign | -0.564 | Destabilizing | 0.139 | N | 0.244 | neutral | N | 0.457097561 | None | None | N |
I/W | 0.7249 | likely_pathogenic | 0.6598 | pathogenic | -0.686 | Destabilizing | 0.995 | D | 0.435 | neutral | None | None | None | None | N |
I/Y | 0.432 | ambiguous | 0.3771 | ambiguous | -0.456 | Destabilizing | 0.013 | N | 0.171 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.