Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32069 | 96430;96431;96432 | chr2:178543939;178543938;178543937 | chr2:179408666;179408665;179408664 |
N2AB | 30428 | 91507;91508;91509 | chr2:178543939;178543938;178543937 | chr2:179408666;179408665;179408664 |
N2A | 29501 | 88726;88727;88728 | chr2:178543939;178543938;178543937 | chr2:179408666;179408665;179408664 |
N2B | 23004 | 69235;69236;69237 | chr2:178543939;178543938;178543937 | chr2:179408666;179408665;179408664 |
Novex-1 | 23129 | 69610;69611;69612 | chr2:178543939;178543938;178543937 | chr2:179408666;179408665;179408664 |
Novex-2 | 23196 | 69811;69812;69813 | chr2:178543939;178543938;178543937 | chr2:179408666;179408665;179408664 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1285541377 | None | 0.996 | N | 0.569 | 0.259 | 0.586419759405 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/F | rs1285541377 | None | 0.996 | N | 0.569 | 0.259 | 0.586419759405 | gnomAD-4.0.0 | 1.8592E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54298E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5389 | ambiguous | 0.503 | ambiguous | -2.629 | Highly Destabilizing | 0.079 | N | 0.297 | neutral | None | None | None | None | N |
L/C | 0.6442 | likely_pathogenic | 0.624 | pathogenic | -1.765 | Destabilizing | 0.1 | N | 0.384 | neutral | None | None | None | None | N |
L/D | 0.9646 | likely_pathogenic | 0.9567 | pathogenic | -2.915 | Highly Destabilizing | 0.982 | D | 0.629 | neutral | None | None | None | None | N |
L/E | 0.7795 | likely_pathogenic | 0.7467 | pathogenic | -2.687 | Highly Destabilizing | 0.939 | D | 0.635 | neutral | None | None | None | None | N |
L/F | 0.2566 | likely_benign | 0.2333 | benign | -1.602 | Destabilizing | 0.996 | D | 0.569 | neutral | N | 0.501773845 | None | None | N |
L/G | 0.8699 | likely_pathogenic | 0.8514 | pathogenic | -3.174 | Highly Destabilizing | 0.939 | D | 0.579 | neutral | None | None | None | None | N |
L/H | 0.504 | ambiguous | 0.4874 | ambiguous | -2.65 | Highly Destabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | N |
L/I | 0.1321 | likely_benign | 0.1307 | benign | -1.049 | Destabilizing | 0.969 | D | 0.503 | neutral | None | None | None | None | N |
L/K | 0.7146 | likely_pathogenic | 0.689 | pathogenic | -1.965 | Destabilizing | 0.939 | D | 0.581 | neutral | None | None | None | None | N |
L/M | 0.1182 | likely_benign | 0.116 | benign | -0.932 | Destabilizing | 0.996 | D | 0.573 | neutral | N | 0.488652619 | None | None | N |
L/N | 0.6965 | likely_pathogenic | 0.6847 | pathogenic | -2.304 | Highly Destabilizing | 0.982 | D | 0.635 | neutral | None | None | None | None | N |
L/P | 0.9892 | likely_pathogenic | 0.988 | pathogenic | -1.558 | Destabilizing | 0.991 | D | 0.649 | neutral | None | None | None | None | N |
L/Q | 0.3714 | ambiguous | 0.348 | ambiguous | -2.16 | Highly Destabilizing | 0.991 | D | 0.609 | neutral | None | None | None | None | N |
L/R | 0.6008 | likely_pathogenic | 0.576 | pathogenic | -1.68 | Destabilizing | 0.991 | D | 0.601 | neutral | None | None | None | None | N |
L/S | 0.5313 | ambiguous | 0.4945 | ambiguous | -2.991 | Highly Destabilizing | 0.159 | N | 0.361 | neutral | N | 0.389909777 | None | None | N |
L/T | 0.3901 | ambiguous | 0.3555 | ambiguous | -2.622 | Highly Destabilizing | 0.884 | D | 0.512 | neutral | None | None | None | None | N |
L/V | 0.1364 | likely_benign | 0.133 | benign | -1.558 | Destabilizing | 0.826 | D | 0.501 | neutral | N | 0.452038458 | None | None | N |
L/W | 0.5847 | likely_pathogenic | 0.5628 | ambiguous | -2.028 | Highly Destabilizing | 0.999 | D | 0.619 | neutral | N | 0.500126962 | None | None | N |
L/Y | 0.5575 | ambiguous | 0.5345 | ambiguous | -1.747 | Destabilizing | 0.997 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.