Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32072 | 96439;96440;96441 | chr2:178543930;178543929;178543928 | chr2:179408657;179408656;179408655 |
N2AB | 30431 | 91516;91517;91518 | chr2:178543930;178543929;178543928 | chr2:179408657;179408656;179408655 |
N2A | 29504 | 88735;88736;88737 | chr2:178543930;178543929;178543928 | chr2:179408657;179408656;179408655 |
N2B | 23007 | 69244;69245;69246 | chr2:178543930;178543929;178543928 | chr2:179408657;179408656;179408655 |
Novex-1 | 23132 | 69619;69620;69621 | chr2:178543930;178543929;178543928 | chr2:179408657;179408656;179408655 |
Novex-2 | 23199 | 69820;69821;69822 | chr2:178543930;178543929;178543928 | chr2:179408657;179408656;179408655 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.971 | D | 0.87 | 0.696 | 0.932966899989 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs1375176606 | -0.612 | 0.247 | N | 0.523 | 0.237 | 0.365317461125 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/L | rs1375176606 | -0.612 | 0.247 | N | 0.523 | 0.237 | 0.365317461125 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | N | None | 5.65867E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5686 | likely_pathogenic | 0.4873 | ambiguous | -2.212 | Highly Destabilizing | 0.822 | D | 0.678 | prob.neutral | D | 0.524880715 | None | None | N |
V/C | 0.8936 | likely_pathogenic | 0.8764 | pathogenic | -1.926 | Destabilizing | 0.998 | D | 0.75 | deleterious | None | None | None | None | N |
V/D | 0.9787 | likely_pathogenic | 0.9684 | pathogenic | -2.887 | Highly Destabilizing | 0.993 | D | 0.871 | deleterious | None | None | None | None | N |
V/E | 0.9498 | likely_pathogenic | 0.9283 | pathogenic | -2.74 | Highly Destabilizing | 0.99 | D | 0.86 | deleterious | N | 0.514284878 | None | None | N |
V/F | 0.6205 | likely_pathogenic | 0.5513 | ambiguous | -1.452 | Destabilizing | 0.956 | D | 0.768 | deleterious | None | None | None | None | N |
V/G | 0.8627 | likely_pathogenic | 0.8157 | pathogenic | -2.685 | Highly Destabilizing | 0.971 | D | 0.87 | deleterious | D | 0.525641184 | None | None | N |
V/H | 0.98 | likely_pathogenic | 0.971 | pathogenic | -2.336 | Highly Destabilizing | 0.998 | D | 0.844 | deleterious | None | None | None | None | N |
V/I | 0.075 | likely_benign | 0.0733 | benign | -0.924 | Destabilizing | 0.019 | N | 0.338 | neutral | None | None | None | None | N |
V/K | 0.9673 | likely_pathogenic | 0.9515 | pathogenic | -2.054 | Highly Destabilizing | 0.978 | D | 0.866 | deleterious | None | None | None | None | N |
V/L | 0.3166 | likely_benign | 0.2815 | benign | -0.924 | Destabilizing | 0.247 | N | 0.523 | neutral | N | 0.447478 | None | None | N |
V/M | 0.3053 | likely_benign | 0.2632 | benign | -0.933 | Destabilizing | 0.489 | N | 0.575 | neutral | N | 0.489379767 | None | None | N |
V/N | 0.9371 | likely_pathogenic | 0.9141 | pathogenic | -2.237 | Highly Destabilizing | 0.993 | D | 0.871 | deleterious | None | None | None | None | N |
V/P | 0.9879 | likely_pathogenic | 0.9822 | pathogenic | -1.324 | Destabilizing | 0.993 | D | 0.858 | deleterious | None | None | None | None | N |
V/Q | 0.948 | likely_pathogenic | 0.9247 | pathogenic | -2.21 | Highly Destabilizing | 0.978 | D | 0.854 | deleterious | None | None | None | None | N |
V/R | 0.9545 | likely_pathogenic | 0.9297 | pathogenic | -1.65 | Destabilizing | 0.978 | D | 0.863 | deleterious | None | None | None | None | N |
V/S | 0.8056 | likely_pathogenic | 0.751 | pathogenic | -2.81 | Highly Destabilizing | 0.978 | D | 0.844 | deleterious | None | None | None | None | N |
V/T | 0.5623 | ambiguous | 0.4859 | ambiguous | -2.536 | Highly Destabilizing | 0.86 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/W | 0.9872 | likely_pathogenic | 0.9795 | pathogenic | -1.899 | Destabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | N |
V/Y | 0.9552 | likely_pathogenic | 0.9356 | pathogenic | -1.575 | Destabilizing | 0.978 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.