Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32084 | 96475;96476;96477 | chr2:178543894;178543893;178543892 | chr2:179408621;179408620;179408619 |
N2AB | 30443 | 91552;91553;91554 | chr2:178543894;178543893;178543892 | chr2:179408621;179408620;179408619 |
N2A | 29516 | 88771;88772;88773 | chr2:178543894;178543893;178543892 | chr2:179408621;179408620;179408619 |
N2B | 23019 | 69280;69281;69282 | chr2:178543894;178543893;178543892 | chr2:179408621;179408620;179408619 |
Novex-1 | 23144 | 69655;69656;69657 | chr2:178543894;178543893;178543892 | chr2:179408621;179408620;179408619 |
Novex-2 | 23211 | 69856;69857;69858 | chr2:178543894;178543893;178543892 | chr2:179408621;179408620;179408619 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.201 | N | 0.455 | 0.224 | 0.141422826196 | gnomAD-4.0.0 | 1.36848E-06 | None | None | Phosphothreonine | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79902E-06 | 0 | 0 |
T/I | None | None | 0.004 | N | 0.288 | 0.18 | 0.253205268125 | gnomAD-4.0.0 | 3.60097E-06 | None | None | Phosphothreonine | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1062 | likely_benign | 0.1052 | benign | -1.31 | Destabilizing | 0.201 | N | 0.455 | neutral | N | 0.476295265 | Phosphothreonine | None | N |
T/C | 0.315 | likely_benign | 0.323 | benign | -0.879 | Destabilizing | 0.992 | D | 0.545 | neutral | None | None | Phosphothreonine | None | N |
T/D | 0.5506 | ambiguous | 0.5209 | ambiguous | -0.535 | Destabilizing | 0.92 | D | 0.534 | neutral | None | None | Phosphothreonine | None | N |
T/E | 0.3633 | ambiguous | 0.3544 | ambiguous | -0.417 | Destabilizing | 0.766 | D | 0.504 | neutral | None | None | Phosphothreonine | None | N |
T/F | 0.2106 | likely_benign | 0.1932 | benign | -1.242 | Destabilizing | 0.85 | D | 0.579 | neutral | None | None | Phosphothreonine | None | N |
T/G | 0.3479 | ambiguous | 0.3428 | ambiguous | -1.655 | Destabilizing | 0.766 | D | 0.531 | neutral | None | None | Phosphothreonine | None | N |
T/H | 0.2069 | likely_benign | 0.2077 | benign | -1.795 | Destabilizing | 0.992 | D | 0.607 | neutral | None | None | Phosphothreonine | None | N |
T/I | 0.095 | likely_benign | 0.0905 | benign | -0.435 | Destabilizing | 0.004 | N | 0.288 | neutral | N | 0.479800197 | Phosphothreonine | None | N |
T/K | 0.2214 | likely_benign | 0.21 | benign | -0.469 | Destabilizing | 0.549 | D | 0.487 | neutral | N | 0.493902857 | Phosphothreonine | None | N |
T/L | 0.0951 | likely_benign | 0.0886 | benign | -0.435 | Destabilizing | 0.048 | N | 0.405 | neutral | None | None | Phosphothreonine | None | N |
T/M | 0.0821 | likely_benign | 0.0811 | benign | -0.252 | Destabilizing | 0.048 | N | 0.389 | neutral | None | None | Phosphothreonine | None | N |
T/N | 0.1503 | likely_benign | 0.1439 | benign | -0.794 | Destabilizing | 0.92 | D | 0.506 | neutral | None | None | Phosphothreonine | None | N |
T/P | 0.8814 | likely_pathogenic | 0.8279 | pathogenic | -0.696 | Destabilizing | 0.963 | D | 0.529 | neutral | N | 0.519860836 | Phosphothreonine | None | N |
T/Q | 0.2184 | likely_benign | 0.2204 | benign | -0.785 | Destabilizing | 0.92 | D | 0.539 | neutral | None | None | Phosphothreonine | None | N |
T/R | 0.1634 | likely_benign | 0.1515 | benign | -0.507 | Destabilizing | 0.81 | D | 0.533 | neutral | N | 0.515470208 | Phosphothreonine | None | N |
T/S | 0.1246 | likely_benign | 0.124 | benign | -1.196 | Destabilizing | 0.549 | D | 0.497 | neutral | N | 0.51493149 | Phosphothreonine | None | N |
T/V | 0.0846 | likely_benign | 0.0852 | benign | -0.696 | Destabilizing | 0.002 | N | 0.169 | neutral | None | None | Phosphothreonine | None | N |
T/W | 0.5716 | likely_pathogenic | 0.552 | ambiguous | -1.153 | Destabilizing | 0.992 | D | 0.635 | neutral | None | None | Phosphothreonine | None | N |
T/Y | 0.2635 | likely_benign | 0.2555 | benign | -0.866 | Destabilizing | 0.92 | D | 0.594 | neutral | None | None | Phosphothreonine | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.