Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32116 | 96571;96572;96573 | chr2:178543627;178543626;178543625 | chr2:179408354;179408353;179408352 |
N2AB | 30475 | 91648;91649;91650 | chr2:178543627;178543626;178543625 | chr2:179408354;179408353;179408352 |
N2A | 29548 | 88867;88868;88869 | chr2:178543627;178543626;178543625 | chr2:179408354;179408353;179408352 |
N2B | 23051 | 69376;69377;69378 | chr2:178543627;178543626;178543625 | chr2:179408354;179408353;179408352 |
Novex-1 | 23176 | 69751;69752;69753 | chr2:178543627;178543626;178543625 | chr2:179408354;179408353;179408352 |
Novex-2 | 23243 | 69952;69953;69954 | chr2:178543627;178543626;178543625 | chr2:179408354;179408353;179408352 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.975 | N | 0.533 | 0.361 | 0.378498632473 | gnomAD-4.0.0 | 6.90551E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01367E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2333 | likely_benign | 0.2272 | benign | -0.658 | Destabilizing | 0.96 | D | 0.502 | neutral | N | 0.503685495 | None | None | N |
E/C | 0.9147 | likely_pathogenic | 0.9106 | pathogenic | -0.269 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
E/D | 0.0992 | likely_benign | 0.098 | benign | -0.643 | Destabilizing | 0.002 | N | 0.135 | neutral | N | 0.423165841 | None | None | N |
E/F | 0.8605 | likely_pathogenic | 0.8544 | pathogenic | -0.321 | Destabilizing | 0.998 | D | 0.656 | neutral | None | None | None | None | N |
E/G | 0.2791 | likely_benign | 0.2779 | benign | -0.92 | Destabilizing | 0.975 | D | 0.533 | neutral | N | 0.513094412 | None | None | N |
E/H | 0.6492 | likely_pathogenic | 0.6515 | pathogenic | -0.264 | Destabilizing | 0.998 | D | 0.534 | neutral | None | None | None | None | N |
E/I | 0.6493 | likely_pathogenic | 0.6363 | pathogenic | 0.023 | Stabilizing | 0.997 | D | 0.661 | neutral | None | None | None | None | N |
E/K | 0.4979 | ambiguous | 0.4865 | ambiguous | -0.032 | Destabilizing | 0.956 | D | 0.491 | neutral | N | 0.517558869 | None | None | N |
E/L | 0.6636 | likely_pathogenic | 0.6527 | pathogenic | 0.023 | Stabilizing | 0.99 | D | 0.644 | neutral | None | None | None | None | N |
E/M | 0.6621 | likely_pathogenic | 0.6501 | pathogenic | 0.22 | Stabilizing | 0.995 | D | 0.583 | neutral | None | None | None | None | N |
E/N | 0.3214 | likely_benign | 0.3159 | benign | -0.475 | Destabilizing | 0.862 | D | 0.496 | neutral | None | None | None | None | N |
E/P | 0.965 | likely_pathogenic | 0.9627 | pathogenic | -0.183 | Destabilizing | 0.977 | D | 0.577 | neutral | None | None | None | None | N |
E/Q | 0.2895 | likely_benign | 0.2941 | benign | -0.409 | Destabilizing | 0.969 | D | 0.515 | neutral | N | 0.503552209 | None | None | N |
E/R | 0.6241 | likely_pathogenic | 0.6214 | pathogenic | 0.238 | Stabilizing | 0.995 | D | 0.537 | neutral | None | None | None | None | N |
E/S | 0.2903 | likely_benign | 0.2948 | benign | -0.658 | Destabilizing | 0.939 | D | 0.463 | neutral | None | None | None | None | N |
E/T | 0.3452 | ambiguous | 0.3553 | ambiguous | -0.443 | Destabilizing | 0.977 | D | 0.53 | neutral | None | None | None | None | N |
E/V | 0.4133 | ambiguous | 0.3997 | ambiguous | -0.183 | Destabilizing | 0.994 | D | 0.531 | neutral | N | 0.47842313 | None | None | N |
E/W | 0.9468 | likely_pathogenic | 0.944 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
E/Y | 0.7325 | likely_pathogenic | 0.7209 | pathogenic | -0.066 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.