Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32149 | 96670;96671;96672 | chr2:178543528;178543527;178543526 | chr2:179408255;179408254;179408253 |
N2AB | 30508 | 91747;91748;91749 | chr2:178543528;178543527;178543526 | chr2:179408255;179408254;179408253 |
N2A | 29581 | 88966;88967;88968 | chr2:178543528;178543527;178543526 | chr2:179408255;179408254;179408253 |
N2B | 23084 | 69475;69476;69477 | chr2:178543528;178543527;178543526 | chr2:179408255;179408254;179408253 |
Novex-1 | 23209 | 69850;69851;69852 | chr2:178543528;178543527;178543526 | chr2:179408255;179408254;179408253 |
Novex-2 | 23276 | 70051;70052;70053 | chr2:178543528;178543527;178543526 | chr2:179408255;179408254;179408253 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs886042242 | 0.213 | 0.828 | N | 0.369 | 0.254 | 0.530948259028 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
M/I | rs886042242 | 0.213 | 0.828 | N | 0.369 | 0.254 | 0.530948259028 | gnomAD-4.0.0 | 1.59257E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
M/R | rs766743444 | None | 0.998 | N | 0.329 | 0.527 | 0.625177984591 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
M/R | rs766743444 | None | 0.998 | N | 0.329 | 0.527 | 0.625177984591 | gnomAD-4.0.0 | 4.96064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.7841E-06 | 0 | 0 |
M/T | rs766743444 | 0.465 | 0.979 | N | 0.292 | 0.457 | 0.637230306968 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
M/T | rs766743444 | 0.465 | 0.979 | N | 0.292 | 0.457 | 0.637230306968 | gnomAD-4.0.0 | 2.0538E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.04465E-05 | None | 0 | 0 | 8.99776E-07 | 0 | 0 |
M/V | rs972033083 | 0.066 | 0.828 | N | 0.307 | 0.242 | 0.517322629239 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
M/V | rs972033083 | 0.066 | 0.828 | N | 0.307 | 0.242 | 0.517322629239 | gnomAD-4.0.0 | 4.77794E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71765E-06 | 1.43312E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.5656 | likely_pathogenic | 0.5013 | ambiguous | -0.536 | Destabilizing | 0.963 | D | 0.326 | neutral | None | None | None | None | I |
M/C | 0.7359 | likely_pathogenic | 0.7648 | pathogenic | -0.407 | Destabilizing | 1.0 | D | 0.331 | neutral | None | None | None | None | I |
M/D | 0.952 | likely_pathogenic | 0.9491 | pathogenic | 0.286 | Stabilizing | 0.999 | D | 0.421 | neutral | None | None | None | None | I |
M/E | 0.7843 | likely_pathogenic | 0.7652 | pathogenic | 0.231 | Stabilizing | 0.999 | D | 0.365 | neutral | None | None | None | None | I |
M/F | 0.5212 | ambiguous | 0.4815 | ambiguous | -0.173 | Destabilizing | 0.969 | D | 0.295 | neutral | None | None | None | None | I |
M/G | 0.6482 | likely_pathogenic | 0.6381 | pathogenic | -0.717 | Destabilizing | 0.999 | D | 0.404 | neutral | None | None | None | None | I |
M/H | 0.6398 | likely_pathogenic | 0.6385 | pathogenic | 0.108 | Stabilizing | 1.0 | D | 0.401 | neutral | None | None | None | None | I |
M/I | 0.8051 | likely_pathogenic | 0.7351 | pathogenic | -0.151 | Destabilizing | 0.828 | D | 0.369 | neutral | N | 0.478133689 | None | None | I |
M/K | 0.3276 | likely_benign | 0.31 | benign | 0.378 | Stabilizing | 0.993 | D | 0.34 | neutral | N | 0.396688528 | None | None | I |
M/L | 0.1753 | likely_benign | 0.1549 | benign | -0.151 | Destabilizing | 0.03 | N | 0.128 | neutral | N | 0.477440256 | None | None | I |
M/N | 0.6816 | likely_pathogenic | 0.6621 | pathogenic | 0.572 | Stabilizing | 0.999 | D | 0.391 | neutral | None | None | None | None | I |
M/P | 0.9643 | likely_pathogenic | 0.9546 | pathogenic | -0.25 | Destabilizing | 0.999 | D | 0.387 | neutral | None | None | None | None | I |
M/Q | 0.3011 | likely_benign | 0.2988 | benign | 0.385 | Stabilizing | 0.999 | D | 0.287 | neutral | None | None | None | None | I |
M/R | 0.3431 | ambiguous | 0.3195 | benign | 0.883 | Stabilizing | 0.998 | D | 0.329 | neutral | N | 0.355343338 | None | None | I |
M/S | 0.5421 | ambiguous | 0.4944 | ambiguous | 0.094 | Stabilizing | 0.995 | D | 0.335 | neutral | None | None | None | None | I |
M/T | 0.471 | ambiguous | 0.4053 | ambiguous | 0.14 | Stabilizing | 0.979 | D | 0.292 | neutral | N | 0.382585868 | None | None | I |
M/V | 0.1985 | likely_benign | 0.1584 | benign | -0.25 | Destabilizing | 0.828 | D | 0.307 | neutral | N | 0.437113786 | None | None | I |
M/W | 0.804 | likely_pathogenic | 0.7836 | pathogenic | -0.127 | Destabilizing | 1.0 | D | 0.38 | neutral | None | None | None | None | I |
M/Y | 0.7246 | likely_pathogenic | 0.7051 | pathogenic | 0.01 | Stabilizing | 0.999 | D | 0.327 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.