Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3215 | 9868;9869;9870 | chr2:178766441;178766440;178766439 | chr2:179631168;179631167;179631166 |
N2AB | 3215 | 9868;9869;9870 | chr2:178766441;178766440;178766439 | chr2:179631168;179631167;179631166 |
N2A | 3215 | 9868;9869;9870 | chr2:178766441;178766440;178766439 | chr2:179631168;179631167;179631166 |
N2B | 3169 | 9730;9731;9732 | chr2:178766441;178766440;178766439 | chr2:179631168;179631167;179631166 |
Novex-1 | 3169 | 9730;9731;9732 | chr2:178766441;178766440;178766439 | chr2:179631168;179631167;179631166 |
Novex-2 | 3169 | 9730;9731;9732 | chr2:178766441;178766440;178766439 | chr2:179631168;179631167;179631166 |
Novex-3 | 3215 | 9868;9869;9870 | chr2:178766441;178766440;178766439 | chr2:179631168;179631167;179631166 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.999 | D | 0.861 | 0.659 | 0.516326692288 | gnomAD-4.0.0 | 1.59051E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0217E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8002 | likely_pathogenic | 0.7962 | pathogenic | -1.03 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
A/D | 0.826 | likely_pathogenic | 0.8631 | pathogenic | -0.804 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
A/E | 0.5996 | likely_pathogenic | 0.5998 | pathogenic | -0.837 | Destabilizing | 0.999 | D | 0.767 | deleterious | N | 0.498557583 | None | None | N |
A/F | 0.7586 | likely_pathogenic | 0.7945 | pathogenic | -1.057 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
A/G | 0.3358 | likely_benign | 0.3406 | ambiguous | -1.155 | Destabilizing | 0.996 | D | 0.521 | neutral | D | 0.567178943 | None | None | N |
A/H | 0.8567 | likely_pathogenic | 0.8546 | pathogenic | -1.216 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
A/I | 0.6739 | likely_pathogenic | 0.7341 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
A/K | 0.8067 | likely_pathogenic | 0.8178 | pathogenic | -1.03 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
A/L | 0.6214 | likely_pathogenic | 0.6605 | pathogenic | -0.375 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
A/M | 0.5672 | likely_pathogenic | 0.6032 | pathogenic | -0.367 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
A/N | 0.731 | likely_pathogenic | 0.7501 | pathogenic | -0.792 | Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
A/P | 0.972 | likely_pathogenic | 0.9827 | pathogenic | -0.51 | Destabilizing | 0.999 | D | 0.861 | deleterious | D | 0.650001637 | None | None | N |
A/Q | 0.6423 | likely_pathogenic | 0.6121 | pathogenic | -0.943 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
A/R | 0.6718 | likely_pathogenic | 0.6825 | pathogenic | -0.716 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
A/S | 0.1275 | likely_benign | 0.1261 | benign | -1.229 | Destabilizing | 0.957 | D | 0.325 | neutral | N | 0.506933316 | None | None | N |
A/T | 0.2389 | likely_benign | 0.2758 | benign | -1.155 | Destabilizing | 0.992 | D | 0.571 | neutral | D | 0.58262553 | None | None | N |
A/V | 0.4148 | ambiguous | 0.4818 | ambiguous | -0.51 | Destabilizing | 0.998 | D | 0.619 | neutral | D | 0.648369659 | None | None | N |
A/W | 0.9629 | likely_pathogenic | 0.97 | pathogenic | -1.339 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
A/Y | 0.8664 | likely_pathogenic | 0.8761 | pathogenic | -0.933 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.