Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32163 | 96712;96713;96714 | chr2:178543486;178543485;178543484 | chr2:179408213;179408212;179408211 |
N2AB | 30522 | 91789;91790;91791 | chr2:178543486;178543485;178543484 | chr2:179408213;179408212;179408211 |
N2A | 29595 | 89008;89009;89010 | chr2:178543486;178543485;178543484 | chr2:179408213;179408212;179408211 |
N2B | 23098 | 69517;69518;69519 | chr2:178543486;178543485;178543484 | chr2:179408213;179408212;179408211 |
Novex-1 | 23223 | 69892;69893;69894 | chr2:178543486;178543485;178543484 | chr2:179408213;179408212;179408211 |
Novex-2 | 23290 | 70093;70094;70095 | chr2:178543486;178543485;178543484 | chr2:179408213;179408212;179408211 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1448896859 | -1.234 | 0.046 | N | 0.451 | 0.109 | 0.408853032482 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/F | rs1448896859 | -1.234 | 0.046 | N | 0.451 | 0.109 | 0.408853032482 | gnomAD-4.0.0 | 1.59147E-06 | None | None | None | None | N | None | 5.65547E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1352 | likely_benign | 0.1152 | benign | -1.787 | Destabilizing | 0.91 | D | 0.468 | neutral | None | None | None | None | N |
L/C | 0.3496 | ambiguous | 0.2911 | benign | -0.786 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
L/D | 0.7135 | likely_pathogenic | 0.5961 | pathogenic | -1.399 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
L/E | 0.4533 | ambiguous | 0.3544 | ambiguous | -1.302 | Destabilizing | 0.993 | D | 0.777 | deleterious | None | None | None | None | N |
L/F | 0.093 | likely_benign | 0.083 | benign | -1.068 | Destabilizing | 0.046 | N | 0.451 | neutral | N | 0.445637269 | None | None | N |
L/G | 0.397 | ambiguous | 0.3193 | benign | -2.191 | Highly Destabilizing | 0.993 | D | 0.745 | deleterious | None | None | None | None | N |
L/H | 0.1731 | likely_benign | 0.1324 | benign | -1.38 | Destabilizing | 0.999 | D | 0.752 | deleterious | N | 0.431265249 | None | None | N |
L/I | 0.0676 | likely_benign | 0.0668 | benign | -0.7 | Destabilizing | 0.885 | D | 0.471 | neutral | N | 0.439346015 | None | None | N |
L/K | 0.4231 | ambiguous | 0.3304 | benign | -1.18 | Destabilizing | 0.993 | D | 0.707 | prob.neutral | None | None | None | None | N |
L/M | 0.0718 | likely_benign | 0.0718 | benign | -0.445 | Destabilizing | 0.993 | D | 0.641 | neutral | None | None | None | None | N |
L/N | 0.2211 | likely_benign | 0.1799 | benign | -1.161 | Destabilizing | 0.998 | D | 0.784 | deleterious | None | None | None | None | N |
L/P | 0.8991 | likely_pathogenic | 0.8289 | pathogenic | -1.035 | Destabilizing | 0.997 | D | 0.784 | deleterious | N | 0.462068159 | None | None | N |
L/Q | 0.133 | likely_benign | 0.1106 | benign | -1.218 | Destabilizing | 0.998 | D | 0.744 | deleterious | None | None | None | None | N |
L/R | 0.3202 | likely_benign | 0.2388 | benign | -0.685 | Destabilizing | 0.991 | D | 0.747 | deleterious | N | 0.398382039 | None | None | N |
L/S | 0.1265 | likely_benign | 0.101 | benign | -1.803 | Destabilizing | 0.993 | D | 0.7 | prob.neutral | None | None | None | None | N |
L/T | 0.1014 | likely_benign | 0.0912 | benign | -1.585 | Destabilizing | 0.986 | D | 0.619 | neutral | None | None | None | None | N |
L/V | 0.0625 | likely_benign | 0.0622 | benign | -1.035 | Destabilizing | 0.046 | N | 0.527 | neutral | N | 0.466916618 | None | None | N |
L/W | 0.2717 | likely_benign | 0.2083 | benign | -1.287 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
L/Y | 0.2532 | likely_benign | 0.2162 | benign | -1.006 | Destabilizing | 0.973 | D | 0.655 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.