Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3216396712;96713;96714 chr2:178543486;178543485;178543484chr2:179408213;179408212;179408211
N2AB3052291789;91790;91791 chr2:178543486;178543485;178543484chr2:179408213;179408212;179408211
N2A2959589008;89009;89010 chr2:178543486;178543485;178543484chr2:179408213;179408212;179408211
N2B2309869517;69518;69519 chr2:178543486;178543485;178543484chr2:179408213;179408212;179408211
Novex-12322369892;69893;69894 chr2:178543486;178543485;178543484chr2:179408213;179408212;179408211
Novex-22329070093;70094;70095 chr2:178543486;178543485;178543484chr2:179408213;179408212;179408211
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-122
  • Domain position: 59
  • Structural Position: 90
  • Q(SASA): 0.1682
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs1448896859 -1.234 0.046 N 0.451 0.109 0.408853032482 gnomAD-2.1.1 4.03E-06 None None None None N None 6.46E-05 0 None 0 0 None 0 None 0 0 0
L/F rs1448896859 -1.234 0.046 N 0.451 0.109 0.408853032482 gnomAD-4.0.0 1.59147E-06 None None None None N None 5.65547E-05 0 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1352 likely_benign 0.1152 benign -1.787 Destabilizing 0.91 D 0.468 neutral None None None None N
L/C 0.3496 ambiguous 0.2911 benign -0.786 Destabilizing 0.999 D 0.669 neutral None None None None N
L/D 0.7135 likely_pathogenic 0.5961 pathogenic -1.399 Destabilizing 0.998 D 0.789 deleterious None None None None N
L/E 0.4533 ambiguous 0.3544 ambiguous -1.302 Destabilizing 0.993 D 0.777 deleterious None None None None N
L/F 0.093 likely_benign 0.083 benign -1.068 Destabilizing 0.046 N 0.451 neutral N 0.445637269 None None N
L/G 0.397 ambiguous 0.3193 benign -2.191 Highly Destabilizing 0.993 D 0.745 deleterious None None None None N
L/H 0.1731 likely_benign 0.1324 benign -1.38 Destabilizing 0.999 D 0.752 deleterious N 0.431265249 None None N
L/I 0.0676 likely_benign 0.0668 benign -0.7 Destabilizing 0.885 D 0.471 neutral N 0.439346015 None None N
L/K 0.4231 ambiguous 0.3304 benign -1.18 Destabilizing 0.993 D 0.707 prob.neutral None None None None N
L/M 0.0718 likely_benign 0.0718 benign -0.445 Destabilizing 0.993 D 0.641 neutral None None None None N
L/N 0.2211 likely_benign 0.1799 benign -1.161 Destabilizing 0.998 D 0.784 deleterious None None None None N
L/P 0.8991 likely_pathogenic 0.8289 pathogenic -1.035 Destabilizing 0.997 D 0.784 deleterious N 0.462068159 None None N
L/Q 0.133 likely_benign 0.1106 benign -1.218 Destabilizing 0.998 D 0.744 deleterious None None None None N
L/R 0.3202 likely_benign 0.2388 benign -0.685 Destabilizing 0.991 D 0.747 deleterious N 0.398382039 None None N
L/S 0.1265 likely_benign 0.101 benign -1.803 Destabilizing 0.993 D 0.7 prob.neutral None None None None N
L/T 0.1014 likely_benign 0.0912 benign -1.585 Destabilizing 0.986 D 0.619 neutral None None None None N
L/V 0.0625 likely_benign 0.0622 benign -1.035 Destabilizing 0.046 N 0.527 neutral N 0.466916618 None None N
L/W 0.2717 likely_benign 0.2083 benign -1.287 Destabilizing 0.999 D 0.716 prob.delet. None None None None N
L/Y 0.2532 likely_benign 0.2162 benign -1.006 Destabilizing 0.973 D 0.655 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.