Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32235 | 96928;96929;96930 | chr2:178543270;178543269;178543268 | chr2:179407997;179407996;179407995 |
N2AB | 30594 | 92005;92006;92007 | chr2:178543270;178543269;178543268 | chr2:179407997;179407996;179407995 |
N2A | 29667 | 89224;89225;89226 | chr2:178543270;178543269;178543268 | chr2:179407997;179407996;179407995 |
N2B | 23170 | 69733;69734;69735 | chr2:178543270;178543269;178543268 | chr2:179407997;179407996;179407995 |
Novex-1 | 23295 | 70108;70109;70110 | chr2:178543270;178543269;178543268 | chr2:179407997;179407996;179407995 |
Novex-2 | 23362 | 70309;70310;70311 | chr2:178543270;178543269;178543268 | chr2:179407997;179407996;179407995 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1428828704 | -0.325 | 0.999 | N | 0.806 | 0.434 | 0.421920138742 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1428828704 | -0.325 | 0.999 | N | 0.806 | 0.434 | 0.421920138742 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77254E-05 | None | 0 | 0 | 0 | 0 | 0 |
T/S | None | None | 0.825 | N | 0.308 | 0.237 | 0.275641507738 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1104 | likely_benign | 0.105 | benign | -0.672 | Destabilizing | 0.962 | D | 0.489 | neutral | N | 0.493920492 | None | None | I |
T/C | 0.4036 | ambiguous | 0.3901 | ambiguous | -0.42 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
T/D | 0.5091 | ambiguous | 0.4976 | ambiguous | -0.47 | Destabilizing | 0.998 | D | 0.675 | neutral | None | None | None | None | I |
T/E | 0.3909 | ambiguous | 0.3661 | ambiguous | -0.509 | Destabilizing | 0.998 | D | 0.671 | neutral | None | None | None | None | I |
T/F | 0.2977 | likely_benign | 0.2699 | benign | -0.924 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
T/G | 0.2545 | likely_benign | 0.2591 | benign | -0.878 | Destabilizing | 0.994 | D | 0.624 | neutral | None | None | None | None | I |
T/H | 0.2685 | likely_benign | 0.2652 | benign | -1.244 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
T/I | 0.1737 | likely_benign | 0.1445 | benign | -0.226 | Destabilizing | 0.999 | D | 0.806 | deleterious | N | 0.473196118 | None | None | I |
T/K | 0.2043 | likely_benign | 0.1967 | benign | -0.708 | Destabilizing | 0.998 | D | 0.676 | prob.neutral | None | None | None | None | I |
T/L | 0.094 | likely_benign | 0.0836 | benign | -0.226 | Destabilizing | 0.997 | D | 0.591 | neutral | None | None | None | None | I |
T/M | 0.0961 | likely_benign | 0.0854 | benign | 0.171 | Stabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
T/N | 0.1509 | likely_benign | 0.1396 | benign | -0.589 | Destabilizing | 0.998 | D | 0.686 | prob.neutral | N | 0.499694164 | None | None | I |
T/P | 0.3849 | ambiguous | 0.3916 | ambiguous | -0.344 | Destabilizing | 0.999 | D | 0.807 | deleterious | D | 0.535195112 | None | None | I |
T/Q | 0.2266 | likely_benign | 0.2179 | benign | -0.873 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | I |
T/R | 0.1676 | likely_benign | 0.1654 | benign | -0.377 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | I |
T/S | 0.1248 | likely_benign | 0.1209 | benign | -0.793 | Destabilizing | 0.825 | D | 0.308 | neutral | N | 0.473814774 | None | None | I |
T/V | 0.1456 | likely_benign | 0.1304 | benign | -0.344 | Destabilizing | 0.997 | D | 0.549 | neutral | None | None | None | None | I |
T/W | 0.5644 | likely_pathogenic | 0.5708 | pathogenic | -0.86 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
T/Y | 0.3307 | likely_benign | 0.3208 | benign | -0.62 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.