Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32244 | 96955;96956;96957 | chr2:178543243;178543242;178543241 | chr2:179407970;179407969;179407968 |
N2AB | 30603 | 92032;92033;92034 | chr2:178543243;178543242;178543241 | chr2:179407970;179407969;179407968 |
N2A | 29676 | 89251;89252;89253 | chr2:178543243;178543242;178543241 | chr2:179407970;179407969;179407968 |
N2B | 23179 | 69760;69761;69762 | chr2:178543243;178543242;178543241 | chr2:179407970;179407969;179407968 |
Novex-1 | 23304 | 70135;70136;70137 | chr2:178543243;178543242;178543241 | chr2:179407970;179407969;179407968 |
Novex-2 | 23371 | 70336;70337;70338 | chr2:178543243;178543242;178543241 | chr2:179407970;179407969;179407968 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.061 | N | 0.207 | 0.151 | 0.200317383148 | gnomAD-4.0.0 | 1.59117E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85816E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5429 | ambiguous | 0.5193 | ambiguous | -0.752 | Destabilizing | 0.999 | D | 0.519 | neutral | None | None | None | None | N |
A/D | 0.3512 | ambiguous | 0.3413 | ambiguous | -0.654 | Destabilizing | 0.988 | D | 0.545 | neutral | N | 0.440231449 | None | None | N |
A/E | 0.2446 | likely_benign | 0.2485 | benign | -0.737 | Destabilizing | 0.991 | D | 0.474 | neutral | None | None | None | None | N |
A/F | 0.3161 | likely_benign | 0.2884 | benign | -0.996 | Destabilizing | 0.982 | D | 0.567 | neutral | None | None | None | None | N |
A/G | 0.1669 | likely_benign | 0.1567 | benign | -0.914 | Destabilizing | 0.959 | D | 0.471 | neutral | N | 0.436692498 | None | None | N |
A/H | 0.4683 | ambiguous | 0.4541 | ambiguous | -1.012 | Destabilizing | 0.999 | D | 0.545 | neutral | None | None | None | None | N |
A/I | 0.2009 | likely_benign | 0.1789 | benign | -0.376 | Destabilizing | 0.884 | D | 0.449 | neutral | None | None | None | None | N |
A/K | 0.4293 | ambiguous | 0.4243 | ambiguous | -0.976 | Destabilizing | 0.982 | D | 0.451 | neutral | None | None | None | None | N |
A/L | 0.1751 | likely_benign | 0.1619 | benign | -0.376 | Destabilizing | 0.046 | N | 0.288 | neutral | None | None | None | None | N |
A/M | 0.1988 | likely_benign | 0.1811 | benign | -0.295 | Destabilizing | 0.982 | D | 0.517 | neutral | None | None | None | None | N |
A/N | 0.2737 | likely_benign | 0.2527 | benign | -0.599 | Destabilizing | 0.991 | D | 0.564 | neutral | None | None | None | None | N |
A/P | 0.297 | likely_benign | 0.263 | benign | -0.451 | Destabilizing | 0.996 | D | 0.507 | neutral | N | 0.440290164 | None | None | N |
A/Q | 0.3174 | likely_benign | 0.3213 | benign | -0.806 | Destabilizing | 0.997 | D | 0.528 | neutral | None | None | None | None | N |
A/R | 0.4072 | ambiguous | 0.4216 | ambiguous | -0.582 | Destabilizing | 0.991 | D | 0.52 | neutral | None | None | None | None | N |
A/S | 0.1075 | likely_benign | 0.1046 | benign | -0.938 | Destabilizing | 0.852 | D | 0.483 | neutral | N | 0.4190481 | None | None | N |
A/T | 0.1008 | likely_benign | 0.0928 | benign | -0.927 | Destabilizing | 0.134 | N | 0.336 | neutral | N | 0.440788809 | None | None | N |
A/V | 0.0991 | likely_benign | 0.0926 | benign | -0.451 | Destabilizing | 0.061 | N | 0.207 | neutral | N | 0.418354667 | None | None | N |
A/W | 0.6689 | likely_pathogenic | 0.6533 | pathogenic | -1.243 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
A/Y | 0.4161 | ambiguous | 0.3913 | ambiguous | -0.867 | Destabilizing | 0.997 | D | 0.574 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.