Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32261 | 97006;97007;97008 | chr2:178543192;178543191;178543190 | chr2:179407919;179407918;179407917 |
N2AB | 30620 | 92083;92084;92085 | chr2:178543192;178543191;178543190 | chr2:179407919;179407918;179407917 |
N2A | 29693 | 89302;89303;89304 | chr2:178543192;178543191;178543190 | chr2:179407919;179407918;179407917 |
N2B | 23196 | 69811;69812;69813 | chr2:178543192;178543191;178543190 | chr2:179407919;179407918;179407917 |
Novex-1 | 23321 | 70186;70187;70188 | chr2:178543192;178543191;178543190 | chr2:179407919;179407918;179407917 |
Novex-2 | 23388 | 70387;70388;70389 | chr2:178543192;178543191;178543190 | chr2:179407919;179407918;179407917 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1060500578 | None | 0.77 | N | 0.495 | 0.335 | 0.352693368174 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1060500578 | None | 0.77 | N | 0.495 | 0.335 | 0.352693368174 | gnomAD-4.0.0 | 4.05999E-06 | None | None | None | None | N | None | 0 | 6.15612E-05 | None | 0 | 0 | None | 0 | 0 | 3.61483E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1695 | likely_benign | 0.1713 | benign | -0.675 | Destabilizing | 0.501 | D | 0.383 | neutral | N | 0.4843103 | None | None | N |
E/C | 0.7671 | likely_pathogenic | 0.7723 | pathogenic | -0.412 | Destabilizing | 0.991 | D | 0.625 | neutral | None | None | None | None | N |
E/D | 0.2525 | likely_benign | 0.2444 | benign | -0.87 | Destabilizing | None | N | 0.189 | neutral | N | 0.493161857 | None | None | N |
E/F | 0.7465 | likely_pathogenic | 0.7477 | pathogenic | 0.045 | Stabilizing | 0.946 | D | 0.601 | neutral | None | None | None | None | N |
E/G | 0.2132 | likely_benign | 0.2149 | benign | -1.027 | Destabilizing | 0.77 | D | 0.495 | neutral | N | 0.489313475 | None | None | N |
E/H | 0.3667 | ambiguous | 0.3789 | ambiguous | 0.048 | Stabilizing | 0.013 | N | 0.362 | neutral | None | None | None | None | N |
E/I | 0.4073 | ambiguous | 0.4086 | ambiguous | 0.282 | Stabilizing | 0.891 | D | 0.599 | neutral | None | None | None | None | N |
E/K | 0.1667 | likely_benign | 0.1728 | benign | -0.259 | Destabilizing | 0.482 | N | 0.322 | neutral | N | 0.472535868 | None | None | N |
E/L | 0.403 | ambiguous | 0.4068 | ambiguous | 0.282 | Stabilizing | 0.536 | D | 0.573 | neutral | None | None | None | None | N |
E/M | 0.4514 | ambiguous | 0.4544 | ambiguous | 0.502 | Stabilizing | 0.944 | D | 0.587 | neutral | None | None | None | None | N |
E/N | 0.3253 | likely_benign | 0.3252 | benign | -0.907 | Destabilizing | 0.212 | N | 0.303 | neutral | None | None | None | None | N |
E/P | 0.902 | likely_pathogenic | 0.902 | pathogenic | -0.015 | Destabilizing | 0.549 | D | 0.542 | neutral | None | None | None | None | N |
E/Q | 0.0951 | likely_benign | 0.1007 | benign | -0.762 | Destabilizing | 0.049 | N | 0.208 | neutral | N | 0.463030951 | None | None | N |
E/R | 0.217 | likely_benign | 0.2331 | benign | 0.134 | Stabilizing | 0.711 | D | 0.366 | neutral | None | None | None | None | N |
E/S | 0.1787 | likely_benign | 0.1836 | benign | -1.153 | Destabilizing | 0.571 | D | 0.321 | neutral | None | None | None | None | N |
E/T | 0.1926 | likely_benign | 0.1939 | benign | -0.851 | Destabilizing | 0.647 | D | 0.419 | neutral | None | None | None | None | N |
E/V | 0.2286 | likely_benign | 0.2283 | benign | -0.015 | Destabilizing | 0.815 | D | 0.572 | neutral | N | 0.508072594 | None | None | N |
E/W | 0.8671 | likely_pathogenic | 0.8735 | pathogenic | 0.357 | Stabilizing | 0.998 | D | 0.652 | neutral | None | None | None | None | N |
E/Y | 0.5936 | likely_pathogenic | 0.6042 | pathogenic | 0.326 | Stabilizing | 0.958 | D | 0.595 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.