Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32282 | 97069;97070;97071 | chr2:178543129;178543128;178543127 | chr2:179407856;179407855;179407854 |
N2AB | 30641 | 92146;92147;92148 | chr2:178543129;178543128;178543127 | chr2:179407856;179407855;179407854 |
N2A | 29714 | 89365;89366;89367 | chr2:178543129;178543128;178543127 | chr2:179407856;179407855;179407854 |
N2B | 23217 | 69874;69875;69876 | chr2:178543129;178543128;178543127 | chr2:179407856;179407855;179407854 |
Novex-1 | 23342 | 70249;70250;70251 | chr2:178543129;178543128;178543127 | chr2:179407856;179407855;179407854 |
Novex-2 | 23409 | 70450;70451;70452 | chr2:178543129;178543128;178543127 | chr2:179407856;179407855;179407854 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1446694825 | 0.851 | 0.05 | N | 0.387 | 0.132 | 0.31291088546 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
E/K | rs1446694825 | 0.851 | 0.05 | N | 0.387 | 0.132 | 0.31291088546 | gnomAD-4.0.0 | 3.19332E-06 | None | None | None | None | I | None | 0 | 2.28885E-05 | None | 0 | 0 | None | 0 | 0 | 2.87241E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1875 | likely_benign | 0.1563 | benign | -0.282 | Destabilizing | 0.028 | N | 0.45 | neutral | N | 0.411081978 | None | None | I |
E/C | 0.8656 | likely_pathogenic | 0.8168 | pathogenic | 0.228 | Stabilizing | 0.937 | D | 0.451 | neutral | None | None | None | None | I |
E/D | 0.1816 | likely_benign | 0.1498 | benign | -0.233 | Destabilizing | None | N | 0.115 | neutral | N | 0.417431947 | None | None | I |
E/F | 0.8331 | likely_pathogenic | 0.7785 | pathogenic | -0.387 | Destabilizing | 0.88 | D | 0.493 | neutral | None | None | None | None | I |
E/G | 0.2083 | likely_benign | 0.1722 | benign | -0.439 | Destabilizing | 0.16 | N | 0.502 | neutral | N | 0.4621213 | None | None | I |
E/H | 0.4854 | ambiguous | 0.4331 | ambiguous | -0.222 | Destabilizing | 0.46 | N | 0.331 | neutral | None | None | None | None | I |
E/I | 0.4182 | ambiguous | 0.3441 | ambiguous | 0.084 | Stabilizing | 0.531 | D | 0.513 | neutral | None | None | None | None | I |
E/K | 0.1805 | likely_benign | 0.157 | benign | 0.55 | Stabilizing | 0.05 | N | 0.387 | neutral | N | 0.429918455 | None | None | I |
E/L | 0.4368 | ambiguous | 0.3699 | ambiguous | 0.084 | Stabilizing | 0.137 | N | 0.567 | neutral | None | None | None | None | I |
E/M | 0.5301 | ambiguous | 0.4403 | ambiguous | 0.271 | Stabilizing | 0.168 | N | 0.479 | neutral | None | None | None | None | I |
E/N | 0.3452 | ambiguous | 0.2851 | benign | 0.339 | Stabilizing | 0.069 | N | 0.316 | neutral | None | None | None | None | I |
E/P | 0.4894 | ambiguous | 0.4435 | ambiguous | -0.019 | Destabilizing | 0.046 | N | 0.485 | neutral | None | None | None | None | I |
E/Q | 0.1317 | likely_benign | 0.1214 | benign | 0.344 | Stabilizing | 0.001 | N | 0.118 | neutral | N | 0.433497478 | None | None | I |
E/R | 0.2561 | likely_benign | 0.234 | benign | 0.59 | Stabilizing | 0.145 | N | 0.331 | neutral | None | None | None | None | I |
E/S | 0.2255 | likely_benign | 0.1975 | benign | 0.194 | Stabilizing | 0.003 | N | 0.09 | neutral | None | None | None | None | I |
E/T | 0.2938 | likely_benign | 0.2477 | benign | 0.324 | Stabilizing | 0.05 | N | 0.438 | neutral | None | None | None | None | I |
E/V | 0.2761 | likely_benign | 0.2236 | benign | -0.019 | Destabilizing | 0.079 | N | 0.537 | neutral | N | 0.457278414 | None | None | I |
E/W | 0.9146 | likely_pathogenic | 0.8743 | pathogenic | -0.31 | Destabilizing | 0.987 | D | 0.481 | neutral | None | None | None | None | I |
E/Y | 0.7019 | likely_pathogenic | 0.6367 | pathogenic | -0.153 | Destabilizing | 0.866 | D | 0.508 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.