Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3230 | 9913;9914;9915 | chr2:178766396;178766395;178766394 | chr2:179631123;179631122;179631121 |
N2AB | 3230 | 9913;9914;9915 | chr2:178766396;178766395;178766394 | chr2:179631123;179631122;179631121 |
N2A | 3230 | 9913;9914;9915 | chr2:178766396;178766395;178766394 | chr2:179631123;179631122;179631121 |
N2B | 3184 | 9775;9776;9777 | chr2:178766396;178766395;178766394 | chr2:179631123;179631122;179631121 |
Novex-1 | 3184 | 9775;9776;9777 | chr2:178766396;178766395;178766394 | chr2:179631123;179631122;179631121 |
Novex-2 | 3184 | 9775;9776;9777 | chr2:178766396;178766395;178766394 | chr2:179631123;179631122;179631121 |
Novex-3 | 3230 | 9913;9914;9915 | chr2:178766396;178766395;178766394 | chr2:179631123;179631122;179631121 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.012 | N | 0.294 | 0.182 | 0.200317383148 | gnomAD-4.0.0 | 1.20273E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31513E-06 | 0 | 0 |
T/N | None | None | 0.022 | N | 0.193 | 0.131 | 0.139678290688 | gnomAD-4.0.0 | 1.20273E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31513E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.178 | likely_benign | 0.1428 | benign | -1.029 | Destabilizing | 0.454 | N | 0.455 | neutral | N | 0.32862299 | None | None | I |
T/C | 0.7061 | likely_pathogenic | 0.605 | pathogenic | -0.633 | Destabilizing | 0.998 | D | 0.528 | neutral | None | None | None | None | I |
T/D | 0.7259 | likely_pathogenic | 0.6743 | pathogenic | -0.4 | Destabilizing | 0.728 | D | 0.522 | neutral | None | None | None | None | I |
T/E | 0.6266 | likely_pathogenic | 0.5637 | ambiguous | -0.29 | Destabilizing | 0.842 | D | 0.533 | neutral | None | None | None | None | I |
T/F | 0.4123 | ambiguous | 0.307 | benign | -0.781 | Destabilizing | 0.949 | D | 0.592 | neutral | None | None | None | None | I |
T/G | 0.6203 | likely_pathogenic | 0.5454 | ambiguous | -1.382 | Destabilizing | 0.842 | D | 0.532 | neutral | None | None | None | None | I |
T/H | 0.4066 | ambiguous | 0.326 | benign | -1.465 | Destabilizing | 0.037 | N | 0.345 | neutral | None | None | None | None | I |
T/I | 0.2097 | likely_benign | 0.1657 | benign | -0.139 | Destabilizing | 0.012 | N | 0.294 | neutral | N | 0.34263545 | None | None | I |
T/K | 0.334 | likely_benign | 0.2873 | benign | -0.477 | Destabilizing | 0.842 | D | 0.516 | neutral | None | None | None | None | I |
T/L | 0.187 | likely_benign | 0.1298 | benign | -0.139 | Destabilizing | 0.525 | D | 0.432 | neutral | None | None | None | None | I |
T/M | 0.1243 | likely_benign | 0.1026 | benign | -0.095 | Destabilizing | 0.949 | D | 0.561 | neutral | None | None | None | None | I |
T/N | 0.2319 | likely_benign | 0.1829 | benign | -0.744 | Destabilizing | 0.022 | N | 0.193 | neutral | N | 0.351408224 | None | None | I |
T/P | 0.4504 | ambiguous | 0.371 | ambiguous | -0.403 | Destabilizing | 0.989 | D | 0.625 | neutral | N | 0.343733911 | None | None | I |
T/Q | 0.3949 | ambiguous | 0.3234 | benign | -0.719 | Destabilizing | 0.974 | D | 0.625 | neutral | None | None | None | None | I |
T/R | 0.2974 | likely_benign | 0.25 | benign | -0.465 | Destabilizing | 0.949 | D | 0.609 | neutral | None | None | None | None | I |
T/S | 0.2309 | likely_benign | 0.1854 | benign | -1.097 | Destabilizing | 0.625 | D | 0.511 | neutral | N | 0.346673316 | None | None | I |
T/V | 0.1918 | likely_benign | 0.1495 | benign | -0.403 | Destabilizing | 0.016 | N | 0.187 | neutral | None | None | None | None | I |
T/W | 0.8108 | likely_pathogenic | 0.7257 | pathogenic | -0.751 | Destabilizing | 0.998 | D | 0.552 | neutral | None | None | None | None | I |
T/Y | 0.4909 | ambiguous | 0.3626 | ambiguous | -0.461 | Destabilizing | 0.949 | D | 0.597 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.