Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32317 | 97174;97175;97176 | chr2:178542905;178542904;178542903 | chr2:179407632;179407631;179407630 |
N2AB | 30676 | 92251;92252;92253 | chr2:178542905;178542904;178542903 | chr2:179407632;179407631;179407630 |
N2A | 29749 | 89470;89471;89472 | chr2:178542905;178542904;178542903 | chr2:179407632;179407631;179407630 |
N2B | 23252 | 69979;69980;69981 | chr2:178542905;178542904;178542903 | chr2:179407632;179407631;179407630 |
Novex-1 | 23377 | 70354;70355;70356 | chr2:178542905;178542904;178542903 | chr2:179407632;179407631;179407630 |
Novex-2 | 23444 | 70555;70556;70557 | chr2:178542905;178542904;178542903 | chr2:179407632;179407631;179407630 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | rs779019939 | -0.415 | 0.852 | N | 0.343 | 0.207 | 0.256283259241 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
H/D | rs779019939 | -0.415 | 0.852 | N | 0.343 | 0.207 | 0.256283259241 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/D | rs779019939 | -0.415 | 0.852 | N | 0.343 | 0.207 | 0.256283259241 | gnomAD-4.0.0 | 3.84689E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.18976E-06 | 0 | 0 |
H/Y | None | None | 0.134 | N | 0.244 | 0.16 | 0.239901079897 | gnomAD-4.0.0 | 1.5931E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43345E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4564 | ambiguous | 0.3847 | ambiguous | -0.4 | Destabilizing | 0.939 | D | 0.341 | neutral | None | None | None | None | I |
H/C | 0.2973 | likely_benign | 0.2467 | benign | 0.149 | Stabilizing | 0.999 | D | 0.383 | neutral | None | None | None | None | I |
H/D | 0.6962 | likely_pathogenic | 0.4479 | ambiguous | -0.648 | Destabilizing | 0.852 | D | 0.343 | neutral | N | 0.467063839 | None | None | I |
H/E | 0.7156 | likely_pathogenic | 0.5914 | pathogenic | -0.562 | Destabilizing | 0.884 | D | 0.299 | neutral | None | None | None | None | I |
H/F | 0.414 | ambiguous | 0.3272 | benign | 0.822 | Stabilizing | 0.964 | D | 0.386 | neutral | None | None | None | None | I |
H/G | 0.6379 | likely_pathogenic | 0.54 | ambiguous | -0.744 | Destabilizing | 0.939 | D | 0.364 | neutral | None | None | None | None | I |
H/I | 0.4229 | ambiguous | 0.3301 | benign | 0.535 | Stabilizing | 0.991 | D | 0.379 | neutral | None | None | None | None | I |
H/K | 0.7052 | likely_pathogenic | 0.5853 | pathogenic | -0.461 | Destabilizing | 0.884 | D | 0.351 | neutral | None | None | None | None | I |
H/L | 0.2131 | likely_benign | 0.1576 | benign | 0.535 | Stabilizing | 0.92 | D | 0.405 | neutral | N | 0.437781082 | None | None | I |
H/M | 0.5401 | ambiguous | 0.4948 | ambiguous | 0.256 | Stabilizing | 0.999 | D | 0.344 | neutral | None | None | None | None | I |
H/N | 0.1454 | likely_benign | 0.1215 | benign | -0.735 | Destabilizing | 0.134 | N | 0.193 | neutral | N | 0.414712221 | None | None | I |
H/P | 0.3594 | ambiguous | 0.2851 | benign | 0.245 | Stabilizing | 0.996 | D | 0.369 | neutral | N | 0.486516391 | None | None | I |
H/Q | 0.3981 | ambiguous | 0.3264 | benign | -0.503 | Destabilizing | 0.509 | D | 0.235 | neutral | N | 0.447862002 | None | None | I |
H/R | 0.4089 | ambiguous | 0.2847 | benign | -1.037 | Destabilizing | 0.92 | D | 0.331 | neutral | N | 0.412653351 | None | None | I |
H/S | 0.2837 | likely_benign | 0.2487 | benign | -0.611 | Destabilizing | 0.939 | D | 0.357 | neutral | None | None | None | None | I |
H/T | 0.3323 | likely_benign | 0.2739 | benign | -0.418 | Destabilizing | 0.939 | D | 0.369 | neutral | None | None | None | None | I |
H/V | 0.3353 | likely_benign | 0.2632 | benign | 0.245 | Stabilizing | 0.939 | D | 0.385 | neutral | None | None | None | None | I |
H/W | 0.5469 | ambiguous | 0.4392 | ambiguous | 1.042 | Stabilizing | 0.999 | D | 0.355 | neutral | None | None | None | None | I |
H/Y | 0.1524 | likely_benign | 0.106 | benign | 1.104 | Stabilizing | 0.134 | N | 0.244 | neutral | N | 0.419446037 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.