Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32319 | 97180;97181;97182 | chr2:178542899;178542898;178542897 | chr2:179407626;179407625;179407624 |
N2AB | 30678 | 92257;92258;92259 | chr2:178542899;178542898;178542897 | chr2:179407626;179407625;179407624 |
N2A | 29751 | 89476;89477;89478 | chr2:178542899;178542898;178542897 | chr2:179407626;179407625;179407624 |
N2B | 23254 | 69985;69986;69987 | chr2:178542899;178542898;178542897 | chr2:179407626;179407625;179407624 |
Novex-1 | 23379 | 70360;70361;70362 | chr2:178542899;178542898;178542897 | chr2:179407626;179407625;179407624 |
Novex-2 | 23446 | 70561;70562;70563 | chr2:178542899;178542898;178542897 | chr2:179407626;179407625;179407624 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1395301319 | -0.505 | 0.338 | N | 0.481 | 0.267 | 0.233150807113 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/A | rs1395301319 | -0.505 | 0.338 | N | 0.481 | 0.267 | 0.233150807113 | gnomAD-4.0.0 | 1.59289E-06 | None | None | None | None | I | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | None | None | 0.782 | N | 0.656 | 0.252 | 0.647102547044 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.12 | likely_benign | 0.1203 | benign | -1.151 | Destabilizing | 0.338 | N | 0.481 | neutral | N | 0.43000696 | None | None | I |
P/C | 0.7662 | likely_pathogenic | 0.7311 | pathogenic | -0.827 | Destabilizing | 0.973 | D | 0.711 | prob.delet. | None | None | None | None | I |
P/D | 0.8655 | likely_pathogenic | 0.8253 | pathogenic | -0.89 | Destabilizing | 0.826 | D | 0.48 | neutral | None | None | None | None | I |
P/E | 0.6361 | likely_pathogenic | 0.5853 | pathogenic | -0.944 | Destabilizing | 0.404 | N | 0.493 | neutral | None | None | None | None | I |
P/F | 0.7021 | likely_pathogenic | 0.6502 | pathogenic | -1.012 | Destabilizing | 0.906 | D | 0.697 | prob.neutral | None | None | None | None | I |
P/G | 0.5526 | ambiguous | 0.5439 | ambiguous | -1.392 | Destabilizing | 0.404 | N | 0.601 | neutral | None | None | None | None | I |
P/H | 0.3883 | ambiguous | 0.3289 | benign | -0.894 | Destabilizing | 0.004 | N | 0.437 | neutral | None | None | None | None | I |
P/I | 0.4646 | ambiguous | 0.4477 | ambiguous | -0.624 | Destabilizing | 0.826 | D | 0.697 | prob.neutral | None | None | None | None | I |
P/K | 0.6123 | likely_pathogenic | 0.5429 | ambiguous | -1.034 | Destabilizing | 0.704 | D | 0.479 | neutral | None | None | None | None | I |
P/L | 0.1672 | likely_benign | 0.1443 | benign | -0.624 | Destabilizing | 0.782 | D | 0.656 | neutral | N | 0.420368757 | None | None | I |
P/M | 0.4251 | ambiguous | 0.4016 | ambiguous | -0.494 | Destabilizing | 0.991 | D | 0.673 | neutral | None | None | None | None | I |
P/N | 0.6475 | likely_pathogenic | 0.6106 | pathogenic | -0.798 | Destabilizing | 0.704 | D | 0.595 | neutral | None | None | None | None | I |
P/Q | 0.2816 | likely_benign | 0.2651 | benign | -1.018 | Destabilizing | 0.782 | D | 0.517 | neutral | N | 0.441069316 | None | None | I |
P/R | 0.4123 | ambiguous | 0.3522 | ambiguous | -0.45 | Destabilizing | 0.782 | D | 0.658 | neutral | N | 0.407919534 | None | None | I |
P/S | 0.2812 | likely_benign | 0.2546 | benign | -1.241 | Destabilizing | 0.007 | N | 0.333 | neutral | N | 0.46032708 | None | None | I |
P/T | 0.2113 | likely_benign | 0.1967 | benign | -1.194 | Destabilizing | 0.338 | N | 0.488 | neutral | N | 0.447862002 | None | None | I |
P/V | 0.3097 | likely_benign | 0.298 | benign | -0.764 | Destabilizing | 0.826 | D | 0.627 | neutral | None | None | None | None | I |
P/W | 0.8562 | likely_pathogenic | 0.8145 | pathogenic | -1.137 | Destabilizing | 0.991 | D | 0.698 | prob.neutral | None | None | None | None | I |
P/Y | 0.6844 | likely_pathogenic | 0.6333 | pathogenic | -0.863 | Destabilizing | 0.826 | D | 0.697 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.