Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32337 | 97234;97235;97236 | chr2:178542845;178542844;178542843 | chr2:179407572;179407571;179407570 |
N2AB | 30696 | 92311;92312;92313 | chr2:178542845;178542844;178542843 | chr2:179407572;179407571;179407570 |
N2A | 29769 | 89530;89531;89532 | chr2:178542845;178542844;178542843 | chr2:179407572;179407571;179407570 |
N2B | 23272 | 70039;70040;70041 | chr2:178542845;178542844;178542843 | chr2:179407572;179407571;179407570 |
Novex-1 | 23397 | 70414;70415;70416 | chr2:178542845;178542844;178542843 | chr2:179407572;179407571;179407570 |
Novex-2 | 23464 | 70615;70616;70617 | chr2:178542845;178542844;178542843 | chr2:179407572;179407571;179407570 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | None | N | 0.133 | 0.064 | 0.165133752707 | gnomAD-4.0.0 | 1.59121E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02389E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3997 | ambiguous | 0.3548 | ambiguous | -0.831 | Destabilizing | 0.824 | D | 0.413 | neutral | None | None | None | None | I |
A/D | 0.3155 | likely_benign | 0.2952 | benign | -0.738 | Destabilizing | 0.317 | N | 0.566 | neutral | N | 0.444880412 | None | None | I |
A/E | 0.2417 | likely_benign | 0.2167 | benign | -0.865 | Destabilizing | 0.149 | N | 0.495 | neutral | None | None | None | None | I |
A/F | 0.3045 | likely_benign | 0.2677 | benign | -0.864 | Destabilizing | 0.38 | N | 0.591 | neutral | None | None | None | None | I |
A/G | 0.1569 | likely_benign | 0.1338 | benign | -0.475 | Destabilizing | 0.117 | N | 0.371 | neutral | N | 0.513068274 | None | None | I |
A/H | 0.3861 | ambiguous | 0.3563 | ambiguous | -0.529 | Destabilizing | 0.935 | D | 0.568 | neutral | None | None | None | None | I |
A/I | 0.1478 | likely_benign | 0.1393 | benign | -0.298 | Destabilizing | 0.029 | N | 0.443 | neutral | None | None | None | None | I |
A/K | 0.3507 | ambiguous | 0.3165 | benign | -0.884 | Destabilizing | 0.149 | N | 0.497 | neutral | None | None | None | None | I |
A/L | 0.117 | likely_benign | 0.106 | benign | -0.298 | Destabilizing | 0.035 | N | 0.401 | neutral | None | None | None | None | I |
A/M | 0.1478 | likely_benign | 0.1378 | benign | -0.424 | Destabilizing | 0.38 | N | 0.509 | neutral | None | None | None | None | I |
A/N | 0.2023 | likely_benign | 0.1893 | benign | -0.555 | Destabilizing | 0.38 | N | 0.586 | neutral | None | None | None | None | I |
A/P | 0.4265 | ambiguous | 0.4114 | ambiguous | -0.288 | Destabilizing | 0.484 | N | 0.518 | neutral | N | 0.513241632 | None | None | I |
A/Q | 0.25 | likely_benign | 0.2294 | benign | -0.808 | Destabilizing | 0.555 | D | 0.53 | neutral | None | None | None | None | I |
A/R | 0.3581 | ambiguous | 0.3141 | benign | -0.41 | Destabilizing | 0.38 | N | 0.528 | neutral | None | None | None | None | I |
A/S | 0.0877 | likely_benign | 0.0823 | benign | -0.747 | Destabilizing | 0.062 | N | 0.424 | neutral | N | 0.428062733 | None | None | I |
A/T | 0.0643 | likely_benign | 0.0643 | benign | -0.79 | Destabilizing | None | N | 0.133 | neutral | N | 0.393259513 | None | None | I |
A/V | 0.0815 | likely_benign | 0.0788 | benign | -0.288 | Destabilizing | None | N | 0.126 | neutral | N | 0.400494917 | None | None | I |
A/W | 0.7208 | likely_pathogenic | 0.6586 | pathogenic | -1.051 | Destabilizing | 0.935 | D | 0.638 | neutral | None | None | None | None | I |
A/Y | 0.4377 | ambiguous | 0.388 | ambiguous | -0.693 | Destabilizing | 0.555 | D | 0.594 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.