Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32338 | 97237;97238;97239 | chr2:178542842;178542841;178542840 | chr2:179407569;179407568;179407567 |
N2AB | 30697 | 92314;92315;92316 | chr2:178542842;178542841;178542840 | chr2:179407569;179407568;179407567 |
N2A | 29770 | 89533;89534;89535 | chr2:178542842;178542841;178542840 | chr2:179407569;179407568;179407567 |
N2B | 23273 | 70042;70043;70044 | chr2:178542842;178542841;178542840 | chr2:179407569;179407568;179407567 |
Novex-1 | 23398 | 70417;70418;70419 | chr2:178542842;178542841;178542840 | chr2:179407569;179407568;179407567 |
Novex-2 | 23465 | 70618;70619;70620 | chr2:178542842;178542841;178542840 | chr2:179407569;179407568;179407567 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.946 | N | 0.658 | 0.322 | 0.370424759081 | gnomAD-4.0.0 | 2.05258E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79891E-06 | 0 | 1.65651E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4088 | ambiguous | 0.385 | ambiguous | -0.963 | Destabilizing | 0.034 | N | 0.381 | neutral | None | None | None | None | I |
A/D | 0.8183 | likely_pathogenic | 0.8153 | pathogenic | -1.09 | Destabilizing | 0.995 | D | 0.859 | deleterious | N | 0.493309077 | None | None | I |
A/E | 0.7018 | likely_pathogenic | 0.7027 | pathogenic | -1.108 | Destabilizing | 0.988 | D | 0.767 | deleterious | None | None | None | None | I |
A/F | 0.5001 | ambiguous | 0.4682 | ambiguous | -0.963 | Destabilizing | 0.976 | D | 0.859 | deleterious | None | None | None | None | I |
A/G | 0.252 | likely_benign | 0.2246 | benign | -1.142 | Destabilizing | 0.946 | D | 0.658 | neutral | N | 0.511990839 | None | None | I |
A/H | 0.7772 | likely_pathogenic | 0.7697 | pathogenic | -1.358 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | I |
A/I | 0.1819 | likely_benign | 0.1858 | benign | -0.261 | Destabilizing | 0.851 | D | 0.747 | deleterious | None | None | None | None | I |
A/K | 0.7963 | likely_pathogenic | 0.7995 | pathogenic | -1.224 | Destabilizing | 0.988 | D | 0.769 | deleterious | None | None | None | None | I |
A/L | 0.2135 | likely_benign | 0.2242 | benign | -0.261 | Destabilizing | 0.702 | D | 0.708 | prob.delet. | None | None | None | None | I |
A/M | 0.2809 | likely_benign | 0.289 | benign | -0.272 | Destabilizing | 0.988 | D | 0.757 | deleterious | None | None | None | None | I |
A/N | 0.6178 | likely_pathogenic | 0.6304 | pathogenic | -0.958 | Destabilizing | 0.996 | D | 0.863 | deleterious | None | None | None | None | I |
A/P | 0.2292 | likely_benign | 0.2745 | benign | -0.42 | Destabilizing | 0.995 | D | 0.767 | deleterious | N | 0.493135719 | None | None | I |
A/Q | 0.6633 | likely_pathogenic | 0.6725 | pathogenic | -1.074 | Destabilizing | 0.996 | D | 0.752 | deleterious | None | None | None | None | I |
A/R | 0.7346 | likely_pathogenic | 0.7398 | pathogenic | -0.928 | Destabilizing | 0.988 | D | 0.762 | deleterious | None | None | None | None | I |
A/S | 0.1442 | likely_benign | 0.1415 | benign | -1.324 | Destabilizing | 0.946 | D | 0.658 | neutral | N | 0.468450705 | None | None | I |
A/T | 0.0998 | likely_benign | 0.1064 | benign | -1.235 | Destabilizing | 0.896 | D | 0.657 | neutral | N | 0.463159529 | None | None | I |
A/V | 0.0882 | likely_benign | 0.0899 | benign | -0.42 | Destabilizing | 0.011 | N | 0.324 | neutral | N | 0.372811591 | None | None | I |
A/W | 0.8926 | likely_pathogenic | 0.8797 | pathogenic | -1.33 | Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | I |
A/Y | 0.6859 | likely_pathogenic | 0.6724 | pathogenic | -0.906 | Destabilizing | 0.988 | D | 0.863 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.