Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32353 | 97282;97283;97284 | chr2:178542797;178542796;178542795 | chr2:179407524;179407523;179407522 |
N2AB | 30712 | 92359;92360;92361 | chr2:178542797;178542796;178542795 | chr2:179407524;179407523;179407522 |
N2A | 29785 | 89578;89579;89580 | chr2:178542797;178542796;178542795 | chr2:179407524;179407523;179407522 |
N2B | 23288 | 70087;70088;70089 | chr2:178542797;178542796;178542795 | chr2:179407524;179407523;179407522 |
Novex-1 | 23413 | 70462;70463;70464 | chr2:178542797;178542796;178542795 | chr2:179407524;179407523;179407522 |
Novex-2 | 23480 | 70663;70664;70665 | chr2:178542797;178542796;178542795 | chr2:179407524;179407523;179407522 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1250490166 | -0.724 | 0.003 | N | 0.217 | 0.053 | 0.313210971179 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1250490166 | -0.724 | 0.003 | N | 0.217 | 0.053 | 0.313210971179 | gnomAD-4.0.0 | 1.36841E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51915E-05 | None | 0 | 0 | 8.99473E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4052 | ambiguous | 0.3392 | benign | -1.825 | Destabilizing | 0.517 | D | 0.547 | neutral | N | 0.50044848 | None | None | N |
V/C | 0.7069 | likely_pathogenic | 0.6963 | pathogenic | -1.422 | Destabilizing | 0.996 | D | 0.71 | prob.delet. | None | None | None | None | N |
V/D | 0.8038 | likely_pathogenic | 0.7504 | pathogenic | -1.917 | Destabilizing | 0.983 | D | 0.813 | deleterious | N | 0.49791537 | None | None | N |
V/E | 0.6602 | likely_pathogenic | 0.5788 | pathogenic | -1.863 | Destabilizing | 0.987 | D | 0.775 | deleterious | None | None | None | None | N |
V/F | 0.2091 | likely_benign | 0.1825 | benign | -1.34 | Destabilizing | 0.901 | D | 0.745 | deleterious | N | 0.499061614 | None | None | N |
V/G | 0.4731 | ambiguous | 0.4131 | ambiguous | -2.213 | Highly Destabilizing | 0.949 | D | 0.777 | deleterious | N | 0.496901412 | None | None | N |
V/H | 0.7796 | likely_pathogenic | 0.7442 | pathogenic | -1.814 | Destabilizing | 0.996 | D | 0.792 | deleterious | None | None | None | None | N |
V/I | 0.0777 | likely_benign | 0.0717 | benign | -0.825 | Destabilizing | 0.003 | N | 0.217 | neutral | N | 0.431452542 | None | None | N |
V/K | 0.7164 | likely_pathogenic | 0.6486 | pathogenic | -1.567 | Destabilizing | 0.961 | D | 0.778 | deleterious | None | None | None | None | N |
V/L | 0.2361 | likely_benign | 0.1883 | benign | -0.825 | Destabilizing | 0.075 | N | 0.391 | neutral | N | 0.494309155 | None | None | N |
V/M | 0.175 | likely_benign | 0.1387 | benign | -0.712 | Destabilizing | 0.923 | D | 0.634 | neutral | None | None | None | None | N |
V/N | 0.5949 | likely_pathogenic | 0.5357 | ambiguous | -1.471 | Destabilizing | 0.987 | D | 0.817 | deleterious | None | None | None | None | N |
V/P | 0.96 | likely_pathogenic | 0.9557 | pathogenic | -1.125 | Destabilizing | 0.987 | D | 0.767 | deleterious | None | None | None | None | N |
V/Q | 0.6405 | likely_pathogenic | 0.5609 | ambiguous | -1.577 | Destabilizing | 0.987 | D | 0.767 | deleterious | None | None | None | None | N |
V/R | 0.6761 | likely_pathogenic | 0.602 | pathogenic | -1.107 | Destabilizing | 0.987 | D | 0.816 | deleterious | None | None | None | None | N |
V/S | 0.5048 | ambiguous | 0.4349 | ambiguous | -2.046 | Highly Destabilizing | 0.961 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/T | 0.3146 | likely_benign | 0.2599 | benign | -1.873 | Destabilizing | 0.775 | D | 0.559 | neutral | None | None | None | None | N |
V/W | 0.854 | likely_pathogenic | 0.8233 | pathogenic | -1.614 | Destabilizing | 0.996 | D | 0.741 | deleterious | None | None | None | None | N |
V/Y | 0.5753 | likely_pathogenic | 0.554 | ambiguous | -1.312 | Destabilizing | 0.961 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.