Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32365 | 97318;97319;97320 | chr2:178542761;178542760;178542759 | chr2:179407488;179407487;179407486 |
N2AB | 30724 | 92395;92396;92397 | chr2:178542761;178542760;178542759 | chr2:179407488;179407487;179407486 |
N2A | 29797 | 89614;89615;89616 | chr2:178542761;178542760;178542759 | chr2:179407488;179407487;179407486 |
N2B | 23300 | 70123;70124;70125 | chr2:178542761;178542760;178542759 | chr2:179407488;179407487;179407486 |
Novex-1 | 23425 | 70498;70499;70500 | chr2:178542761;178542760;178542759 | chr2:179407488;179407487;179407486 |
Novex-2 | 23492 | 70699;70700;70701 | chr2:178542761;178542760;178542759 | chr2:179407488;179407487;179407486 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.028 | N | 0.481 | 0.275 | 0.424194796918 | gnomAD-4.0.0 | 1.59123E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85829E-06 | 0 | 0 |
T/S | None | None | 0.028 | N | 0.463 | 0.157 | 0.247322355667 | gnomAD-4.0.0 | 3.18246E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77285E-05 | None | 0 | 0 | 2.85829E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0973 | likely_benign | 0.0862 | benign | -1.212 | Destabilizing | 0.309 | N | 0.587 | neutral | D | 0.534177052 | None | None | N |
T/C | 0.3245 | likely_benign | 0.2865 | benign | -1.239 | Destabilizing | 0.996 | D | 0.673 | neutral | None | None | None | None | N |
T/D | 0.5439 | ambiguous | 0.4892 | ambiguous | -1.874 | Destabilizing | 0.91 | D | 0.68 | prob.neutral | None | None | None | None | N |
T/E | 0.4202 | ambiguous | 0.3783 | ambiguous | -1.726 | Destabilizing | 0.91 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/F | 0.1943 | likely_benign | 0.1722 | benign | -0.807 | Destabilizing | 0.953 | D | 0.674 | neutral | None | None | None | None | N |
T/G | 0.2842 | likely_benign | 0.2551 | benign | -1.571 | Destabilizing | 0.59 | D | 0.664 | neutral | None | None | None | None | N |
T/H | 0.2114 | likely_benign | 0.1935 | benign | -1.625 | Destabilizing | 0.996 | D | 0.673 | neutral | None | None | None | None | N |
T/I | 0.127 | likely_benign | 0.1165 | benign | -0.292 | Destabilizing | 0.028 | N | 0.481 | neutral | N | 0.494869302 | None | None | N |
T/K | 0.2349 | likely_benign | 0.2197 | benign | -1.041 | Destabilizing | 0.91 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/L | 0.0925 | likely_benign | 0.0847 | benign | -0.292 | Destabilizing | 0.373 | N | 0.624 | neutral | None | None | None | None | N |
T/M | 0.0869 | likely_benign | 0.0842 | benign | -0.351 | Destabilizing | 0.953 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/N | 0.1404 | likely_benign | 0.1286 | benign | -1.551 | Destabilizing | 0.884 | D | 0.663 | neutral | D | 0.534870485 | None | None | N |
T/P | 0.7286 | likely_pathogenic | 0.691 | pathogenic | -0.569 | Destabilizing | 0.939 | D | 0.693 | prob.neutral | N | 0.511273139 | None | None | N |
T/Q | 0.2268 | likely_benign | 0.2137 | benign | -1.488 | Destabilizing | 0.91 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/R | 0.1805 | likely_benign | 0.1622 | benign | -0.993 | Destabilizing | 0.91 | D | 0.706 | prob.neutral | None | None | None | None | N |
T/S | 0.1198 | likely_benign | 0.1087 | benign | -1.71 | Destabilizing | 0.028 | N | 0.463 | neutral | N | 0.504547578 | None | None | N |
T/V | 0.1184 | likely_benign | 0.1077 | benign | -0.569 | Destabilizing | 0.016 | N | 0.281 | neutral | None | None | None | None | N |
T/W | 0.4744 | ambiguous | 0.4395 | ambiguous | -0.907 | Destabilizing | 0.996 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/Y | 0.2278 | likely_benign | 0.2055 | benign | -0.588 | Destabilizing | 0.984 | D | 0.674 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.