Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32366 | 97321;97322;97323 | chr2:178542758;178542757;178542756 | chr2:179407485;179407484;179407483 |
N2AB | 30725 | 92398;92399;92400 | chr2:178542758;178542757;178542756 | chr2:179407485;179407484;179407483 |
N2A | 29798 | 89617;89618;89619 | chr2:178542758;178542757;178542756 | chr2:179407485;179407484;179407483 |
N2B | 23301 | 70126;70127;70128 | chr2:178542758;178542757;178542756 | chr2:179407485;179407484;179407483 |
Novex-1 | 23426 | 70501;70502;70503 | chr2:178542758;178542757;178542756 | chr2:179407485;179407484;179407483 |
Novex-2 | 23493 | 70702;70703;70704 | chr2:178542758;178542757;178542756 | chr2:179407485;179407484;179407483 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs1695213145 | None | 0.991 | D | 0.828 | 0.885 | 0.938880340865 | gnomAD-4.0.0 | 1.59121E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85824E-06 | 0 | 0 |
I/V | rs1304811622 | -1.848 | 0.02 | D | 0.259 | 0.354 | 0.538792235971 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9212 | likely_pathogenic | 0.8995 | pathogenic | -2.741 | Highly Destabilizing | 0.91 | D | 0.71 | prob.delet. | None | None | None | None | N |
I/C | 0.9296 | likely_pathogenic | 0.9156 | pathogenic | -2.264 | Highly Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
I/D | 0.9967 | likely_pathogenic | 0.9958 | pathogenic | -3.135 | Highly Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
I/E | 0.9892 | likely_pathogenic | 0.9855 | pathogenic | -2.957 | Highly Destabilizing | 0.993 | D | 0.856 | deleterious | None | None | None | None | N |
I/F | 0.4408 | ambiguous | 0.4223 | ambiguous | -1.728 | Destabilizing | 0.991 | D | 0.735 | prob.delet. | D | 0.559255628 | None | None | N |
I/G | 0.9865 | likely_pathogenic | 0.9817 | pathogenic | -3.253 | Highly Destabilizing | 0.993 | D | 0.85 | deleterious | None | None | None | None | N |
I/H | 0.9712 | likely_pathogenic | 0.9646 | pathogenic | -2.582 | Highly Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
I/K | 0.9704 | likely_pathogenic | 0.965 | pathogenic | -2.261 | Highly Destabilizing | 0.993 | D | 0.854 | deleterious | None | None | None | None | N |
I/L | 0.1996 | likely_benign | 0.1862 | benign | -1.278 | Destabilizing | 0.58 | D | 0.445 | neutral | D | 0.54634444 | None | None | N |
I/M | 0.2554 | likely_benign | 0.2365 | benign | -1.266 | Destabilizing | 0.991 | D | 0.699 | prob.neutral | D | 0.566513453 | None | None | N |
I/N | 0.9552 | likely_pathogenic | 0.9469 | pathogenic | -2.524 | Highly Destabilizing | 0.997 | D | 0.857 | deleterious | D | 0.589285231 | None | None | N |
I/P | 0.9936 | likely_pathogenic | 0.9929 | pathogenic | -1.745 | Destabilizing | 0.998 | D | 0.853 | deleterious | None | None | None | None | N |
I/Q | 0.9689 | likely_pathogenic | 0.9623 | pathogenic | -2.481 | Highly Destabilizing | 0.998 | D | 0.871 | deleterious | None | None | None | None | N |
I/R | 0.9539 | likely_pathogenic | 0.947 | pathogenic | -1.782 | Destabilizing | 0.993 | D | 0.864 | deleterious | None | None | None | None | N |
I/S | 0.9447 | likely_pathogenic | 0.9308 | pathogenic | -3.214 | Highly Destabilizing | 0.991 | D | 0.828 | deleterious | D | 0.605304592 | None | None | N |
I/T | 0.9321 | likely_pathogenic | 0.9177 | pathogenic | -2.897 | Highly Destabilizing | 0.939 | D | 0.748 | deleterious | D | 0.604900984 | None | None | N |
I/V | 0.1056 | likely_benign | 0.0932 | benign | -1.745 | Destabilizing | 0.02 | N | 0.259 | neutral | D | 0.579546977 | None | None | N |
I/W | 0.9633 | likely_pathogenic | 0.9605 | pathogenic | -2.066 | Highly Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
I/Y | 0.9046 | likely_pathogenic | 0.9022 | pathogenic | -1.831 | Destabilizing | 0.998 | D | 0.758 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.