Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32378 | 97357;97358;97359 | chr2:178542722;178542721;178542720 | chr2:179407449;179407448;179407447 |
N2AB | 30737 | 92434;92435;92436 | chr2:178542722;178542721;178542720 | chr2:179407449;179407448;179407447 |
N2A | 29810 | 89653;89654;89655 | chr2:178542722;178542721;178542720 | chr2:179407449;179407448;179407447 |
N2B | 23313 | 70162;70163;70164 | chr2:178542722;178542721;178542720 | chr2:179407449;179407448;179407447 |
Novex-1 | 23438 | 70537;70538;70539 | chr2:178542722;178542721;178542720 | chr2:179407449;179407448;179407447 |
Novex-2 | 23505 | 70738;70739;70740 | chr2:178542722;178542721;178542720 | chr2:179407449;179407448;179407447 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | None | N | 0.412 | 0.094 | 0.202086224978 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85832E-06 | 0 | 0 |
T/P | None | None | 0.741 | N | 0.556 | 0.237 | 0.380901646489 | gnomAD-4.0.0 | 1.59125E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77285E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0973 | likely_benign | 0.085 | benign | -1.191 | Destabilizing | 0.027 | N | 0.542 | neutral | N | 0.461976446 | None | None | N |
T/C | 0.2932 | likely_benign | 0.2766 | benign | -0.564 | Destabilizing | 0.824 | D | 0.549 | neutral | None | None | None | None | N |
T/D | 0.508 | ambiguous | 0.4588 | ambiguous | -0.674 | Destabilizing | 0.38 | N | 0.545 | neutral | None | None | None | None | N |
T/E | 0.3107 | likely_benign | 0.2877 | benign | -0.462 | Destabilizing | 0.149 | N | 0.531 | neutral | None | None | None | None | N |
T/F | 0.2018 | likely_benign | 0.1836 | benign | -0.964 | Destabilizing | 0.38 | N | 0.567 | neutral | None | None | None | None | N |
T/G | 0.2378 | likely_benign | 0.2064 | benign | -1.603 | Destabilizing | 0.149 | N | 0.536 | neutral | None | None | None | None | N |
T/H | 0.1901 | likely_benign | 0.172 | benign | -1.569 | Destabilizing | 0.935 | D | 0.571 | neutral | None | None | None | None | N |
T/I | 0.1008 | likely_benign | 0.104 | benign | -0.104 | Destabilizing | None | N | 0.412 | neutral | N | 0.486534168 | None | None | N |
T/K | 0.1511 | likely_benign | 0.146 | benign | 0.103 | Stabilizing | 0.117 | N | 0.531 | neutral | N | 0.467775049 | None | None | N |
T/L | 0.0799 | likely_benign | 0.0758 | benign | -0.104 | Destabilizing | 0.012 | N | 0.51 | neutral | None | None | None | None | N |
T/M | 0.0778 | likely_benign | 0.078 | benign | -0.167 | Destabilizing | 0.035 | N | 0.495 | neutral | None | None | None | None | N |
T/N | 0.1566 | likely_benign | 0.1398 | benign | -0.534 | Destabilizing | 0.38 | N | 0.536 | neutral | None | None | None | None | N |
T/P | 0.6012 | likely_pathogenic | 0.5154 | ambiguous | -0.437 | Destabilizing | 0.741 | D | 0.556 | neutral | N | 0.47822105 | None | None | N |
T/Q | 0.1631 | likely_benign | 0.1594 | benign | -0.32 | Destabilizing | 0.555 | D | 0.555 | neutral | None | None | None | None | N |
T/R | 0.1238 | likely_benign | 0.1087 | benign | -0.202 | Destabilizing | 0.484 | N | 0.557 | neutral | N | 0.476951892 | None | None | N |
T/S | 0.1157 | likely_benign | 0.1018 | benign | -0.927 | Destabilizing | 0.005 | N | 0.431 | neutral | N | 0.499308677 | None | None | N |
T/V | 0.0921 | likely_benign | 0.0946 | benign | -0.437 | Destabilizing | 0.001 | N | 0.315 | neutral | None | None | None | None | N |
T/W | 0.4959 | ambiguous | 0.4714 | ambiguous | -0.978 | Destabilizing | 0.935 | D | 0.625 | neutral | None | None | None | None | N |
T/Y | 0.2316 | likely_benign | 0.2155 | benign | -0.601 | Destabilizing | 0.555 | D | 0.59 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.