Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32380 | 97363;97364;97365 | chr2:178542716;178542715;178542714 | chr2:179407443;179407442;179407441 |
N2AB | 30739 | 92440;92441;92442 | chr2:178542716;178542715;178542714 | chr2:179407443;179407442;179407441 |
N2A | 29812 | 89659;89660;89661 | chr2:178542716;178542715;178542714 | chr2:179407443;179407442;179407441 |
N2B | 23315 | 70168;70169;70170 | chr2:178542716;178542715;178542714 | chr2:179407443;179407442;179407441 |
Novex-1 | 23440 | 70543;70544;70545 | chr2:178542716;178542715;178542714 | chr2:179407443;179407442;179407441 |
Novex-2 | 23507 | 70744;70745;70746 | chr2:178542716;178542715;178542714 | chr2:179407443;179407442;179407441 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.996 | N | 0.665 | 0.536 | 0.45553875121 | gnomAD-4.0.0 | 3.42106E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49742E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2553 | likely_benign | 0.1938 | benign | -1.218 | Destabilizing | 0.996 | D | 0.665 | neutral | N | 0.515319145 | None | None | N |
E/C | 0.8519 | likely_pathogenic | 0.7897 | pathogenic | -0.545 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/D | 0.3953 | ambiguous | 0.3308 | benign | -1.07 | Destabilizing | 0.962 | D | 0.517 | neutral | N | 0.485403295 | None | None | N |
E/F | 0.8234 | likely_pathogenic | 0.7504 | pathogenic | -0.665 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
E/G | 0.4624 | ambiguous | 0.3587 | ambiguous | -1.597 | Destabilizing | 0.992 | D | 0.721 | prob.delet. | N | 0.497431163 | None | None | N |
E/H | 0.5782 | likely_pathogenic | 0.458 | ambiguous | -0.876 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
E/I | 0.3543 | ambiguous | 0.3016 | benign | -0.162 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
E/K | 0.384 | ambiguous | 0.2828 | benign | -0.5 | Destabilizing | 0.992 | D | 0.585 | neutral | N | 0.472200299 | None | None | N |
E/L | 0.4208 | ambiguous | 0.3429 | ambiguous | -0.162 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
E/M | 0.4669 | ambiguous | 0.3981 | ambiguous | 0.415 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
E/N | 0.5174 | ambiguous | 0.4282 | ambiguous | -1.022 | Destabilizing | 0.833 | D | 0.33 | neutral | None | None | None | None | N |
E/P | 0.9899 | likely_pathogenic | 0.9817 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
E/Q | 0.1607 | likely_benign | 0.1229 | benign | -0.889 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | N | 0.508910461 | None | None | N |
E/R | 0.4985 | ambiguous | 0.3824 | ambiguous | -0.326 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/S | 0.3405 | ambiguous | 0.2684 | benign | -1.449 | Destabilizing | 0.994 | D | 0.582 | neutral | None | None | None | None | N |
E/T | 0.2749 | likely_benign | 0.2183 | benign | -1.101 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
E/V | 0.2193 | likely_benign | 0.1857 | benign | -0.495 | Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.432663263 | None | None | N |
E/W | 0.9554 | likely_pathogenic | 0.9233 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/Y | 0.7624 | likely_pathogenic | 0.6677 | pathogenic | -0.345 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.