Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32410 | 97453;97454;97455 | chr2:178542528;178542527;178542526 | chr2:179407255;179407254;179407253 |
N2AB | 30769 | 92530;92531;92532 | chr2:178542528;178542527;178542526 | chr2:179407255;179407254;179407253 |
N2A | 29842 | 89749;89750;89751 | chr2:178542528;178542527;178542526 | chr2:179407255;179407254;179407253 |
N2B | 23345 | 70258;70259;70260 | chr2:178542528;178542527;178542526 | chr2:179407255;179407254;179407253 |
Novex-1 | 23470 | 70633;70634;70635 | chr2:178542528;178542527;178542526 | chr2:179407255;179407254;179407253 |
Novex-2 | 23537 | 70834;70835;70836 | chr2:178542528;178542527;178542526 | chr2:179407255;179407254;179407253 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.001 | N | 0.095 | 0.042 | 0.168933306366 | gnomAD-4.0.0 | 6.85687E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01534E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1637 | likely_benign | 0.1379 | benign | -0.627 | Destabilizing | 0.193 | N | 0.436 | neutral | N | 0.477685434 | None | None | N |
D/C | 0.5734 | likely_pathogenic | 0.469 | ambiguous | -0.049 | Destabilizing | 0.981 | D | 0.476 | neutral | None | None | None | None | N |
D/E | 0.128 | likely_benign | 0.099 | benign | -0.487 | Destabilizing | 0.001 | N | 0.095 | neutral | N | 0.452485883 | None | None | N |
D/F | 0.6392 | likely_pathogenic | 0.5244 | ambiguous | -0.575 | Destabilizing | 0.69 | D | 0.461 | neutral | None | None | None | None | N |
D/G | 0.1792 | likely_benign | 0.1529 | benign | -0.861 | Destabilizing | 0.193 | N | 0.419 | neutral | N | 0.467343087 | None | None | N |
D/H | 0.2813 | likely_benign | 0.2255 | benign | -0.651 | Destabilizing | 0.627 | D | 0.431 | neutral | N | 0.476724382 | None | None | N |
D/I | 0.3624 | ambiguous | 0.28 | benign | -0.044 | Destabilizing | 0.527 | D | 0.451 | neutral | None | None | None | None | N |
D/K | 0.362 | ambiguous | 0.2915 | benign | 0.058 | Stabilizing | 0.241 | N | 0.419 | neutral | None | None | None | None | N |
D/L | 0.3516 | ambiguous | 0.2774 | benign | -0.044 | Destabilizing | 0.241 | N | 0.467 | neutral | None | None | None | None | N |
D/M | 0.5251 | ambiguous | 0.4161 | ambiguous | 0.337 | Stabilizing | 0.944 | D | 0.436 | neutral | None | None | None | None | N |
D/N | 0.1024 | likely_benign | 0.0873 | benign | -0.281 | Destabilizing | 0.001 | N | 0.194 | neutral | N | 0.466836108 | None | None | N |
D/P | 0.8873 | likely_pathogenic | 0.8451 | pathogenic | -0.217 | Destabilizing | 0.818 | D | 0.447 | neutral | None | None | None | None | N |
D/Q | 0.3002 | likely_benign | 0.241 | benign | -0.249 | Destabilizing | 0.241 | N | 0.439 | neutral | None | None | None | None | N |
D/R | 0.4154 | ambiguous | 0.341 | ambiguous | 0.155 | Stabilizing | 0.69 | D | 0.43 | neutral | None | None | None | None | N |
D/S | 0.1081 | likely_benign | 0.0909 | benign | -0.423 | Destabilizing | 0.241 | N | 0.434 | neutral | None | None | None | None | N |
D/T | 0.1723 | likely_benign | 0.1414 | benign | -0.239 | Destabilizing | 0.241 | N | 0.394 | neutral | None | None | None | None | N |
D/V | 0.2225 | likely_benign | 0.1762 | benign | -0.217 | Destabilizing | 0.001 | N | 0.299 | neutral | N | 0.501029192 | None | None | N |
D/W | 0.8828 | likely_pathogenic | 0.8254 | pathogenic | -0.403 | Destabilizing | 0.981 | D | 0.587 | neutral | None | None | None | None | N |
D/Y | 0.2872 | likely_benign | 0.2308 | benign | -0.336 | Destabilizing | 0.773 | D | 0.461 | neutral | N | 0.501830076 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.