Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32424 | 97495;97496;97497 | chr2:178542486;178542485;178542484 | chr2:179407213;179407212;179407211 |
N2AB | 30783 | 92572;92573;92574 | chr2:178542486;178542485;178542484 | chr2:179407213;179407212;179407211 |
N2A | 29856 | 89791;89792;89793 | chr2:178542486;178542485;178542484 | chr2:179407213;179407212;179407211 |
N2B | 23359 | 70300;70301;70302 | chr2:178542486;178542485;178542484 | chr2:179407213;179407212;179407211 |
Novex-1 | 23484 | 70675;70676;70677 | chr2:178542486;178542485;178542484 | chr2:179407213;179407212;179407211 |
Novex-2 | 23551 | 70876;70877;70878 | chr2:178542486;178542485;178542484 | chr2:179407213;179407212;179407211 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 0.085 | D | 0.683 | 0.657 | 0.679066282414 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.6629 | likely_pathogenic | 0.5533 | ambiguous | -1.942 | Destabilizing | 0.928 | D | 0.733 | prob.delet. | D | 0.620898908 | None | None | N |
P/C | 0.956 | likely_pathogenic | 0.933 | pathogenic | -1.364 | Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
P/D | 0.9965 | likely_pathogenic | 0.9949 | pathogenic | -2.706 | Highly Destabilizing | 0.992 | D | 0.845 | deleterious | None | None | None | None | N |
P/E | 0.9903 | likely_pathogenic | 0.9846 | pathogenic | -2.605 | Highly Destabilizing | 0.983 | D | 0.812 | deleterious | None | None | None | None | N |
P/F | 0.9982 | likely_pathogenic | 0.9969 | pathogenic | -1.334 | Destabilizing | 0.999 | D | 0.896 | deleterious | None | None | None | None | N |
P/G | 0.9715 | likely_pathogenic | 0.957 | pathogenic | -2.366 | Highly Destabilizing | 0.983 | D | 0.847 | deleterious | None | None | None | None | N |
P/H | 0.9904 | likely_pathogenic | 0.9846 | pathogenic | -2.244 | Highly Destabilizing | 0.997 | D | 0.885 | deleterious | D | 0.632214255 | None | None | N |
P/I | 0.9828 | likely_pathogenic | 0.9693 | pathogenic | -0.808 | Destabilizing | 0.992 | D | 0.881 | deleterious | None | None | None | None | N |
P/K | 0.9956 | likely_pathogenic | 0.9931 | pathogenic | -1.812 | Destabilizing | 0.895 | D | 0.764 | deleterious | None | None | None | None | N |
P/L | 0.9336 | likely_pathogenic | 0.8836 | pathogenic | -0.808 | Destabilizing | 0.978 | D | 0.887 | deleterious | D | 0.643852848 | None | None | N |
P/M | 0.9828 | likely_pathogenic | 0.9703 | pathogenic | -0.609 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
P/N | 0.9951 | likely_pathogenic | 0.9929 | pathogenic | -1.813 | Destabilizing | 0.983 | D | 0.89 | deleterious | None | None | None | None | N |
P/Q | 0.9834 | likely_pathogenic | 0.9707 | pathogenic | -1.839 | Destabilizing | 0.983 | D | 0.847 | deleterious | None | None | None | None | N |
P/R | 0.9863 | likely_pathogenic | 0.9773 | pathogenic | -1.423 | Destabilizing | 0.085 | N | 0.683 | prob.neutral | D | 0.632214255 | None | None | N |
P/S | 0.9167 | likely_pathogenic | 0.8731 | pathogenic | -2.268 | Highly Destabilizing | 0.978 | D | 0.818 | deleterious | D | 0.589617401 | None | None | N |
P/T | 0.8985 | likely_pathogenic | 0.8443 | pathogenic | -2.06 | Highly Destabilizing | 0.978 | D | 0.814 | deleterious | D | 0.653139434 | None | None | N |
P/V | 0.933 | likely_pathogenic | 0.8892 | pathogenic | -1.157 | Destabilizing | 0.992 | D | 0.885 | deleterious | None | None | None | None | N |
P/W | 0.9992 | likely_pathogenic | 0.9986 | pathogenic | -1.831 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
P/Y | 0.9983 | likely_pathogenic | 0.9971 | pathogenic | -1.502 | Destabilizing | 0.999 | D | 0.896 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.