Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32425 | 97498;97499;97500 | chr2:178542483;178542482;178542481 | chr2:179407210;179407209;179407208 |
N2AB | 30784 | 92575;92576;92577 | chr2:178542483;178542482;178542481 | chr2:179407210;179407209;179407208 |
N2A | 29857 | 89794;89795;89796 | chr2:178542483;178542482;178542481 | chr2:179407210;179407209;179407208 |
N2B | 23360 | 70303;70304;70305 | chr2:178542483;178542482;178542481 | chr2:179407210;179407209;179407208 |
Novex-1 | 23485 | 70678;70679;70680 | chr2:178542483;178542482;178542481 | chr2:179407210;179407209;179407208 |
Novex-2 | 23552 | 70879;70880;70881 | chr2:178542483;178542482;178542481 | chr2:179407210;179407209;179407208 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.722 | N | 0.531 | 0.092 | 0.351614576976 | gnomAD-4.0.0 | 1.59297E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43316E-05 | 0 |
E/K | rs1169300714 | 0.654 | 0.565 | N | 0.579 | 0.176 | 0.298056030225 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1169300714 | 0.654 | 0.565 | N | 0.579 | 0.176 | 0.298056030225 | gnomAD-4.0.0 | 1.59306E-06 | None | None | None | None | N | None | 5.65803E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0979 | likely_benign | 0.1011 | benign | -0.121 | Destabilizing | 0.565 | D | 0.549 | neutral | N | 0.465185822 | None | None | N |
E/C | 0.681 | likely_pathogenic | 0.6502 | pathogenic | -0.117 | Destabilizing | 0.996 | D | 0.662 | neutral | None | None | None | None | N |
E/D | 0.138 | likely_benign | 0.1308 | benign | -0.281 | Destabilizing | 0.722 | D | 0.531 | neutral | N | 0.500087829 | None | None | N |
E/F | 0.5845 | likely_pathogenic | 0.5448 | ambiguous | -0.086 | Destabilizing | 0.923 | D | 0.617 | neutral | None | None | None | None | N |
E/G | 0.1582 | likely_benign | 0.144 | benign | -0.263 | Destabilizing | 0.901 | D | 0.505 | neutral | N | 0.49143106 | None | None | N |
E/H | 0.3336 | likely_benign | 0.3112 | benign | 0.417 | Stabilizing | 0.979 | D | 0.521 | neutral | None | None | None | None | N |
E/I | 0.1684 | likely_benign | 0.1684 | benign | 0.201 | Stabilizing | 0.858 | D | 0.616 | neutral | None | None | None | None | N |
E/K | 0.1048 | likely_benign | 0.1003 | benign | 0.462 | Stabilizing | 0.565 | D | 0.579 | neutral | N | 0.462068159 | None | None | N |
E/L | 0.1824 | likely_benign | 0.1825 | benign | 0.201 | Stabilizing | 0.024 | N | 0.397 | neutral | None | None | None | None | N |
E/M | 0.2649 | likely_benign | 0.2615 | benign | 0.064 | Stabilizing | 0.923 | D | 0.587 | neutral | None | None | None | None | N |
E/N | 0.2162 | likely_benign | 0.1998 | benign | 0.149 | Stabilizing | 0.923 | D | 0.501 | neutral | None | None | None | None | N |
E/P | 0.3715 | ambiguous | 0.3996 | ambiguous | 0.112 | Stabilizing | 0.961 | D | 0.519 | neutral | None | None | None | None | N |
E/Q | 0.1033 | likely_benign | 0.1006 | benign | 0.174 | Stabilizing | 0.034 | N | 0.172 | neutral | N | 0.505995081 | None | None | N |
E/R | 0.1782 | likely_benign | 0.1674 | benign | 0.684 | Stabilizing | 0.858 | D | 0.49 | neutral | None | None | None | None | N |
E/S | 0.1512 | likely_benign | 0.1481 | benign | 0.019 | Stabilizing | 0.633 | D | 0.56 | neutral | None | None | None | None | N |
E/T | 0.1454 | likely_benign | 0.1456 | benign | 0.144 | Stabilizing | 0.923 | D | 0.504 | neutral | None | None | None | None | N |
E/V | 0.1088 | likely_benign | 0.11 | benign | 0.112 | Stabilizing | 0.565 | D | 0.508 | neutral | N | 0.489102831 | None | None | N |
E/W | 0.8336 | likely_pathogenic | 0.8008 | pathogenic | 0.003 | Stabilizing | 0.996 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/Y | 0.4862 | ambiguous | 0.4441 | ambiguous | 0.149 | Stabilizing | 0.961 | D | 0.589 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.