Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32437 | 97534;97535;97536 | chr2:178542447;178542446;178542445 | chr2:179407174;179407173;179407172 |
N2AB | 30796 | 92611;92612;92613 | chr2:178542447;178542446;178542445 | chr2:179407174;179407173;179407172 |
N2A | 29869 | 89830;89831;89832 | chr2:178542447;178542446;178542445 | chr2:179407174;179407173;179407172 |
N2B | 23372 | 70339;70340;70341 | chr2:178542447;178542446;178542445 | chr2:179407174;179407173;179407172 |
Novex-1 | 23497 | 70714;70715;70716 | chr2:178542447;178542446;178542445 | chr2:179407174;179407173;179407172 |
Novex-2 | 23564 | 70915;70916;70917 | chr2:178542447;178542446;178542445 | chr2:179407174;179407173;179407172 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.997 | N | 0.603 | 0.263 | 0.66879460378 | gnomAD-4.0.0 | 1.5916E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85871E-06 | 0 | 0 |
V/L | rs2154142556 | None | 0.997 | N | 0.635 | 0.394 | 0.676840377379 | gnomAD-4.0.0 | 1.5916E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85871E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6081 | likely_pathogenic | 0.6302 | pathogenic | -2.055 | Highly Destabilizing | 0.999 | D | 0.611 | neutral | D | 0.556454416 | None | None | N |
V/C | 0.9398 | likely_pathogenic | 0.9514 | pathogenic | -1.19 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/D | 0.9988 | likely_pathogenic | 0.999 | pathogenic | -2.968 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
V/E | 0.9958 | likely_pathogenic | 0.9964 | pathogenic | -2.631 | Highly Destabilizing | 1.0 | D | 0.919 | deleterious | D | 0.56857119 | None | None | N |
V/F | 0.9354 | likely_pathogenic | 0.9338 | pathogenic | -1.1 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
V/G | 0.9194 | likely_pathogenic | 0.928 | pathogenic | -2.666 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | D | 0.56857119 | None | None | N |
V/H | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -2.668 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/I | 0.1129 | likely_benign | 0.1029 | benign | -0.257 | Destabilizing | 0.997 | D | 0.603 | neutral | N | 0.491972565 | None | None | N |
V/K | 0.9977 | likely_pathogenic | 0.9979 | pathogenic | -1.441 | Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
V/L | 0.5842 | likely_pathogenic | 0.539 | ambiguous | -0.257 | Destabilizing | 0.997 | D | 0.635 | neutral | N | 0.490524494 | None | None | N |
V/M | 0.7337 | likely_pathogenic | 0.6816 | pathogenic | -0.556 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
V/N | 0.9954 | likely_pathogenic | 0.9961 | pathogenic | -2.223 | Highly Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
V/P | 0.9929 | likely_pathogenic | 0.9944 | pathogenic | -0.841 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
V/Q | 0.9954 | likely_pathogenic | 0.9961 | pathogenic | -1.785 | Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
V/R | 0.9942 | likely_pathogenic | 0.9948 | pathogenic | -1.799 | Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
V/S | 0.9442 | likely_pathogenic | 0.9522 | pathogenic | -2.634 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
V/T | 0.7667 | likely_pathogenic | 0.7475 | pathogenic | -2.13 | Highly Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
V/W | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -1.59 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/Y | 0.9963 | likely_pathogenic | 0.9966 | pathogenic | -1.299 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.