Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32460 | 97603;97604;97605 | chr2:178542378;178542377;178542376 | chr2:179407105;179407104;179407103 |
N2AB | 30819 | 92680;92681;92682 | chr2:178542378;178542377;178542376 | chr2:179407105;179407104;179407103 |
N2A | 29892 | 89899;89900;89901 | chr2:178542378;178542377;178542376 | chr2:179407105;179407104;179407103 |
N2B | 23395 | 70408;70409;70410 | chr2:178542378;178542377;178542376 | chr2:179407105;179407104;179407103 |
Novex-1 | 23520 | 70783;70784;70785 | chr2:178542378;178542377;178542376 | chr2:179407105;179407104;179407103 |
Novex-2 | 23587 | 70984;70985;70986 | chr2:178542378;178542377;178542376 | chr2:179407105;179407104;179407103 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs965156924 | None | 0.996 | N | 0.538 | 0.344 | 0.292787519742 | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | N | None | 1.69E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs965156924 | None | 0.996 | N | 0.538 | 0.344 | 0.292787519742 | gnomAD-4.0.0 | 4.60254E-05 | None | None | None | None | N | None | 1.69E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8933 | likely_pathogenic | 0.8653 | pathogenic | -0.797 | Destabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | N |
K/C | 0.8765 | likely_pathogenic | 0.8245 | pathogenic | -0.836 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/D | 0.9768 | likely_pathogenic | 0.9708 | pathogenic | 0.048 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
K/E | 0.8793 | likely_pathogenic | 0.8429 | pathogenic | 0.173 | Stabilizing | 0.996 | D | 0.538 | neutral | N | 0.479318049 | None | None | N |
K/F | 0.9812 | likely_pathogenic | 0.9738 | pathogenic | -0.545 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
K/G | 0.94 | likely_pathogenic | 0.9218 | pathogenic | -1.157 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
K/H | 0.5579 | ambiguous | 0.4919 | ambiguous | -1.413 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/I | 0.8255 | likely_pathogenic | 0.7918 | pathogenic | 0.136 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/L | 0.8298 | likely_pathogenic | 0.789 | pathogenic | 0.136 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
K/M | 0.7683 | likely_pathogenic | 0.7247 | pathogenic | 0.009 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | N | 0.498943241 | None | None | N |
K/N | 0.9366 | likely_pathogenic | 0.9179 | pathogenic | -0.493 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | D | 0.522385899 | None | None | N |
K/P | 0.9607 | likely_pathogenic | 0.9487 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
K/Q | 0.4709 | ambiguous | 0.4155 | ambiguous | -0.558 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | N | 0.489788981 | None | None | N |
K/R | 0.0912 | likely_benign | 0.0858 | benign | -0.493 | Destabilizing | 0.64 | D | 0.275 | neutral | N | 0.492025706 | None | None | N |
K/S | 0.9066 | likely_pathogenic | 0.8824 | pathogenic | -1.263 | Destabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | N |
K/T | 0.6232 | likely_pathogenic | 0.5862 | pathogenic | -0.917 | Destabilizing | 0.999 | D | 0.748 | deleterious | N | 0.480186986 | None | None | N |
K/V | 0.7837 | likely_pathogenic | 0.7465 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/W | 0.9588 | likely_pathogenic | 0.9364 | pathogenic | -0.36 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/Y | 0.9242 | likely_pathogenic | 0.9026 | pathogenic | -0.067 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.