Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32469 | 97630;97631;97632 | chr2:178542351;178542350;178542349 | chr2:179407078;179407077;179407076 |
N2AB | 30828 | 92707;92708;92709 | chr2:178542351;178542350;178542349 | chr2:179407078;179407077;179407076 |
N2A | 29901 | 89926;89927;89928 | chr2:178542351;178542350;178542349 | chr2:179407078;179407077;179407076 |
N2B | 23404 | 70435;70436;70437 | chr2:178542351;178542350;178542349 | chr2:179407078;179407077;179407076 |
Novex-1 | 23529 | 70810;70811;70812 | chr2:178542351;178542350;178542349 | chr2:179407078;179407077;179407076 |
Novex-2 | 23596 | 71011;71012;71013 | chr2:178542351;178542350;178542349 | chr2:179407078;179407077;179407076 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1280768790 | -0.039 | 0.999 | N | 0.601 | 0.421 | 0.485846224565 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/K | rs1280768790 | -0.039 | 0.999 | N | 0.601 | 0.421 | 0.485846224565 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1280768790 | -0.039 | 0.999 | N | 0.601 | 0.421 | 0.485846224565 | gnomAD-4.0.0 | 3.71895E-06 | None | None | None | None | N | None | 2.67037E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39074E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3788 | ambiguous | 0.2906 | benign | -0.947 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | N | 0.496109312 | None | None | N |
E/C | 0.9285 | likely_pathogenic | 0.8989 | pathogenic | -0.619 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
E/D | 0.4308 | ambiguous | 0.3498 | ambiguous | -1.35 | Destabilizing | 0.999 | D | 0.476 | neutral | N | 0.494779412 | None | None | N |
E/F | 0.9499 | likely_pathogenic | 0.9188 | pathogenic | -0.503 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
E/G | 0.525 | ambiguous | 0.4284 | ambiguous | -1.334 | Destabilizing | 1.0 | D | 0.767 | deleterious | N | 0.500984384 | None | None | N |
E/H | 0.8164 | likely_pathogenic | 0.7206 | pathogenic | -0.975 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | N |
E/I | 0.6882 | likely_pathogenic | 0.6097 | pathogenic | 0.122 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/K | 0.4249 | ambiguous | 0.3123 | benign | -1.215 | Destabilizing | 0.999 | D | 0.601 | neutral | N | 0.481902169 | None | None | N |
E/L | 0.7762 | likely_pathogenic | 0.6849 | pathogenic | 0.122 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/M | 0.7409 | likely_pathogenic | 0.6582 | pathogenic | 0.717 | Stabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/N | 0.6222 | likely_pathogenic | 0.521 | ambiguous | -1.525 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/P | 0.9013 | likely_pathogenic | 0.8467 | pathogenic | -0.213 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/Q | 0.2548 | likely_benign | 0.199 | benign | -1.344 | Destabilizing | 1.0 | D | 0.619 | neutral | N | 0.485714058 | None | None | N |
E/R | 0.5706 | likely_pathogenic | 0.4397 | ambiguous | -0.975 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/S | 0.4473 | ambiguous | 0.3603 | ambiguous | -1.918 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
E/T | 0.4387 | ambiguous | 0.3505 | ambiguous | -1.606 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
E/V | 0.5153 | ambiguous | 0.4274 | ambiguous | -0.213 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.48560238 | None | None | N |
E/W | 0.9831 | likely_pathogenic | 0.9708 | pathogenic | -0.39 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/Y | 0.9045 | likely_pathogenic | 0.8512 | pathogenic | -0.328 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.